RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 TRIM77I1YAP6 450 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 LATO43561 262 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 ZNF217O75362 1048 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 ALDOBP05062 364 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 PRPS2P11908 318 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 DRD5P21918 477 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 HNRNPA2B1P22626 353 aaKnown RBP10.27□□□□□ -0.76
LSM3-201ENST00000306024 KIAA1024LP59773 190 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 CDK3Q00526 305 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 ACSM2AQ08AH3 577 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 TSC22D1Q15714 1073 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 ACSM2BQ68CK6 577 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 TMEM92Q6UXU6 159 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 CREB3L4Q8TEY5 395 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 FBLIM1Q8WUP2 373 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 MAL2Q969L2 176 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 RNF31Q96EP0 1072 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 ART5Q96L15 291 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 GUCD1Q96NT3 240 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 OPALINQ96PE5 141 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 TPT1P8Q9HAU6 139 aa10.27□□□□□ -0.76
LSM3-201ENST00000306024 CUEDC1Q9NWM3 386 aaPredicted RBP10.27□□□□□ -0.76
LSM3-201ENST00000306024 CNOT2Q9NZN8 540 aaKnown RBP10.27□□□□□ -0.76
LSM3-201ENST00000306024 H2AFY2Q9P0M6 372 aaPredicted RBP10.27□□□□□ -0.76
LSM3-201ENST00000306024 A0A0A6YYJ9 748 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 A0A1B0GVI7 797 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 TLX2O43763 284 aaPredicted RBP10.27□□□□□ -0.77
LSM3-201ENST00000306024 APBB3O95704 486 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 PRR35P0CG20 571 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 CBSLP0DN79 551 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 PEPDP12955 493 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 CCR7P32248 378 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 DRD3P35462 400 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 CBSP35520 551 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 OPCMLQ14982 345 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 HEPACAMQ14CZ8 416 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 P2RY14Q15391 338 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 PLEKHS1Q5SXH7 462 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 LAMTOR1Q6IAA8 161 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 TECPR1Q7Z6L1 1165 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 PLA2G15Q8NCC3 412 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 NEIL3Q8TAT5 605 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 SLC25A46Q96AG3 418 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 EPYCQ99645 322 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 PRO3102Q9H379 93 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 SGK2Q9HBY8 427 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 PTTG3PQ9NZH4 202 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 PTPRZ1P23471 2315 aaPredicted RBP10.27□□□□□ -0.77
LSM3-201ENST00000306024 HYKKA2RU49 373 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 SLC35F4A4IF30 521 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 LOC730098B7Z3J9 87 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 WDPCPO95876 746 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 ZP3P21754 424 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 MAOBP27338 520 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 ARHGDIBP52566 201 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 CRISP1P54107 249 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 SSX1Q16384 188 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 DUOXA1Q1HG43 343 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 ZNF765Q7L2R6 523 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 TAF8Q7Z7C8 310 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 MS4A15Q8N5U1 240 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 SYT14Q8NB59 555 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 DPYSL5Q9BPU6 564 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 NIPSNAP1Q9BPW8 284 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 EMC7Q9NPA0 242 aa10.27□□□□□ -0.77
LSM3-201ENST00000306024 TSPAN11A1L157 253 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 LDOC1O95751 146 aaPredicted RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 HOXD4P09016 255 aaPredicted RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 BDKRB1P46663 353 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 FNTBP49356 437 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 TUSC1Q2TAM9 212 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 AKIRIN2Q53H80 203 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 ZNF542PQ5EBM4 170 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 GPR139Q6DWJ6 353 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 CLDN22Q8N7P3 220 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 TFGQ92734 400 aaPredicted RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 KIAA1143Q96AT1 154 aaPredicted RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 KLHDC7BQ96G42 594 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 RADILQ96JH8 1075 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 ZNF285Q96NJ3 590 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 WDFY2Q96P53 400 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 DOHHQ9BU89 302 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 DPEP2Q9H4A9 486 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 HHATLQ9HCP6 504 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 RLIMQ9NVW2 624 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 WNT16Q9UBV4 365 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 FXYD6-FXYD2A0A087WZ82 144 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 B3GALT4O96024 378 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 H2AFB2P0C5Z0 115 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 ZNF8P17098 575 aaPredicted RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 GABRG2P18507 467 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 PVALBP20472 110 aaPredicted RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 CDKN2CP42773 168 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 DHPSP49366 369 aaPredicted RBP10.26□□□□□ -0.77
LSM3-201ENST00000306024 XKP51811 444 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 BAMBIQ13145 260 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 ZNF273Q14593 569 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 HIST2H2AA3Q6FI13 130 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 TMIGD1Q6UXZ0 262 aa10.26□□□□□ -0.77
LSM3-201ENST00000306024 ABI3BPQ7Z7G0 1075 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms