RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 DCAF4L2Q8NA75 395 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF461Q8TAF7 563 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 DOK4Q8TEW6 326 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 MAL2Q969L2 176 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 UPRTQ96BW1 309 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 FAXDC2Q96IV6 333 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 SMIM3Q9BZL3 60 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 LILRB3O75022 631 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 PORP16435 677 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 CREB3L2Q70SY1 520 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 LARP4Q71RC2 724 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 CREB3L4Q8TEY5 395 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 TMEM175Q9BSA9 504 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 CWH43Q9H720 699 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 DYNLRB1Q9NP97 96 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 F5H5K5 113 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 GPR137BO60478 399 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 APBB3O95704 486 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 CBX7O95931 251 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 HPRP00739 348 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 IGFBP1P08833 259 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 SFRP5Q5T4F7 317 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 TMEM53Q6P2H8 277 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 Q6ZVL8 140 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 NIPA2Q8N8Q9 360 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 NMNAT2Q9BZQ4 307 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 SLC25A31Q9H0C2 315 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 OR51B6Q9H340 312 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 ACOT13Q9NPJ3 140 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 HSD17B7P56937 341 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 RPS15AP62244 130 aaKnown RBP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 GALNT1Q10472 559 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 NPRL3Q12980 569 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 FAM122CQ6P4D5 195 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 ST6GALNAC4Q9H4F1 302 aa9.87□□□□□ -0.83
CLIP1-201ENST00000302528 NLE1Q9NVX2 485 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-201ENST00000302528 IMPA2O14732 288 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 SGCEO43556 437 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 DBHP09172 617 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 RAB3AP20336 220 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 AGTR2P50052 363 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 HADHBP55084 474 aaKnown RBP9.86□□□□□ -0.83
CLIP1-201ENST00000302528 SLC14A1Q13336 389 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 METTL11BQ5VVY1 283 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 KRTCAP2Q8N6L1 136 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 OR5D16Q8NGK9 328 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 UHRF2Q96PU4 802 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 PDCD1LG2Q9BQ51 273 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 TCEAL2Q9H3H9 227 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-201ENST00000302528 SUSD2Q9UGT4 822 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 DCDC2BA2VCK2 349 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 TRAPPC13A5PLN9 417 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 H0Y8G0 127 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 F2RL1P55085 397 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 NSDHLQ15738 373 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 LY6G5CQ5SRR4 150 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 HEPHL1Q6MZM0 1159 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF585AQ6P3V2 769 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 USP53Q70EK8 1073 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 C4orf32Q8N8J7 132 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 SGK3Q96BR1 496 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 FAM46AQ96IP4 442 aaKnown RBP9.86□□□□□ -0.83
CLIP1-201ENST00000302528 SUSD3Q96L08 255 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 LPAR4Q99677 370 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 HEBP1Q9NRV9 189 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 TXNL4BQ9NX01 149 aaKnown RBP9.86□□□□□ -0.83
CLIP1-201ENST00000302528 PCDHGA7Q9Y5G6 932 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 RPS10-NUDT3A0A1W2PQS6 291 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 LEFTY2O00292 366 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 SYPP08247 313 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 RPS17P08708 135 aaKnown RBP9.86□□□□□ -0.83
CLIP1-201ENST00000302528 BMP4P12644 408 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 JUNDP17535 347 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 FECHP22830 423 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 GABRR1P24046 479 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 RPS10P46783 165 aaKnown RBP9.86□□□□□ -0.83
CLIP1-201ENST00000302528 MTNR1AP48039 350 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 GRIN2CQ14957 1233 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 DUSP7Q16829 419 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF791Q3KP31 576 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-201ENST00000302528 PKDCCQ504Y2 493 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 SLX4IPQ5VYV7 408 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 CNKSR3Q6P9H4 555 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 HCAR1Q9BXC0 346 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 SOX17Q9H6I2 414 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-201ENST00000302528 RETREG1Q9H6L5 497 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 TSPAN11A1L157 253 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 LAMTOR5O43504 91 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 B4GAT1O43505 415 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 FBXO45P0C2W1 286 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 GPX6P59796 221 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 TMEM201Q5SNT2 666 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 C6orf136Q5SQH8 315 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 PRAMEF8Q5VWM4 474 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 PRAMEF7Q5VXH5 474 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 LBX2Q6XYB7 198 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 FAM43BQ6ZT52 329 aaPredicted RBP9.86□□□□□ -0.83
CLIP1-201ENST00000302528 ANKRD13BQ86YJ7 626 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 SYT14Q8NB59 555 aa9.86□□□□□ -0.83
CLIP1-201ENST00000302528 PAQR8Q8TEZ7 354 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms