RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 RBPJQ06330 500 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 MRPL49Q13405 166 aaKnown RBP7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 TMED1Q13445 227 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 CCNIQ14094 377 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 ANKDD1AQ495B1 522 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 KCTD18Q6PI47 426 aaPredicted RBP7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 FRRS1Q6ZNA5 592 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 PLEKHG7Q6ZR37 379 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 TMEM178AQ8NBL3 297 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 HDAC2Q92769 488 aaKnown RBP7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 CDS1Q92903 461 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 ELP4Q96EB1 424 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 CCDC74BQ96LY2 380 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 UTP23Q9BRU9 249 aaKnown RBP7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 MND1Q9BWT6 205 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 GLIPR2Q9H4G4 154 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 FOLH1BQ9HBA9 442 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 OLAHQ9NV23 265 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 ZNF624Q9P2J8 865 aaPredicted RBP7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 RIMS3Q9UJD0 308 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 ZNF443Q9Y2A4 671 aaPredicted RBP7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 LRRC42Q9Y546 428 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 LOC100506127A0A0U1RQW1 187 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 SH3D21A4FU49 640 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 CYB5AP00167 134 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 TACR1P25103 407 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 LTBRP36941 435 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 EIF1P41567 113 aaKnown RBP7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 CRISP1P54107 249 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 CTBP2P56545 445 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 C16orf72Q14CZ0 275 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 MLC1Q15049 377 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 TRAM1Q15629 374 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 GTDC1Q4AE62 458 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 WDR74Q6RFH5 385 aaPredicted RBP7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 ADGRF3Q8IZF5 1079 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 OIT3Q8WWZ8 545 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 DGCR14Q96DF8 476 aaKnown RBP7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 HIST1H2AAQ96QV6 131 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 TUBB1Q9H4B7 451 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 TRIM36Q9NQ86 728 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 ATG4BQ9Y4P1 393 aa7.78□□□□□ -1.16
SNRPD1-201ENST00000300413 IGHV1OR21-1A0A087WYE8 117 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 TTLL8A6PVC2 850 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 CENPBD1B2RD01 187 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 EIF4E2O60573 245 aaKnown RBP7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 LYNP07948 512 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 DNASE1L1P49184 302 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 EEF1A2Q05639 463 aaKnown RBP7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 C17orf67Q0P5P2 114 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 GINS1Q14691 196 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 NNATQ16517 81 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 MFSD12Q6NUT3 480 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 PDSS2Q86YH6 399 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 OR14L1PQ8NHC6 308 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 SNIP1Q8TAD8 396 aaKnown RBP7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 THAP3Q8WTV1 239 aaPredicted RBP7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 ACOT11Q8WXI4 607 aaPredicted RBP7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 TAS2R10Q9NYW0 307 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 PCDHGB6Q9Y5F9 930 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 COMMD3-BMI1R4GMX3 469 aa7.77□□□□□ -1.16
SNRPD1-201ENST00000300413 TCRBV3S1A0A5B6 114 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 BLOC1S5-TXNDC5H3BN57 136 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 PGRMC2O15173 223 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 NDUFB2O95178 105 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 MAPK3P27361 379 aaPredicted RBP7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 AVPR2P30518 371 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 SLC15A1P46059 708 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 OR1E2P47887 323 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 SLC9A3P48764 834 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 CLRN1P58418 232 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 KCNJ10P78508 379 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 PLP2Q04941 152 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 PRSS42Q7Z5A4 293 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 ABHD12BQ7Z5M8 362 aaPredicted RBP7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 FGD2Q7Z6J4 655 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 PTRH1Q86Y79 214 aaKnown RBP7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 OR4K5Q8NGD3 323 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 FNDC8Q8TC99 324 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 NETO1Q8TDF5 533 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 C1GALT1C1Q96EU7 318 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 MACROD1Q9BQ69 325 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 SOX17Q9H6I2 414 aaPredicted RBP7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 N6AMT1Q9Y5N5 214 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 HCRTR1O43613 425 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 ECDO95905 644 aaPredicted RBP7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 IGLV3-19P01714 112 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 C1QAP02745 245 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 T-ENOLP0DO92 83 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 BSGP35613 385 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 DAP3P51398 398 aaKnown RBP7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 CRYZQ08257 329 aaKnown RBP7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 SLC14A1Q13336 389 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 MICAQ29983 383 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 AP1ARQ63HQ0 302 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 ZNF547Q8IVP9 402 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 CA13Q8N1Q1 262 aa7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 TSEN15Q8WW01 171 aaKnown RBP7.77□□□□□ -1.17
SNRPD1-201ENST00000300413 PATE1Q8WXA2 126 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms