RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SYNPRQ8TBG9 265 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 ST6GALNAC5Q9BVH7 336 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 DNTTIP1Q9H147 329 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 SLC25A18Q9H1K4 315 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 TSPAN10Q9H1Z9 355 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-201ENST00000299333 PTGES2Q9H7Z7 377 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF736B4DX44 427 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-201ENST00000299333 H7C1Q1 480 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 KDELR3O43731 214 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 FADS1O60427 444 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 GNSP15586 552 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 PFKLP17858 780 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 CDKN2DP55273 166 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF169Q14929 603 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-201ENST00000299333 SKA3Q8IX90 412 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 DOK4Q8TEW6 326 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 RANBP9Q96S59 729 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 SLC38A1Q9H2H9 487 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 BCL9LQ86UU0 1499 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 SCO2O43819 266 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 C8AP07357 584 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF30P17039 623 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 HOXB9P17482 250 aaPredicted RBP14.11□□□□□ -0.15
SCN3B-201ENST00000299333 GK3PQ14409 553 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 NRMQ8IXM6 262 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 CCDC71LQ8N9Z2 235 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 HS6ST2Q96MM7 605 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 G6PC3Q9BUM1 346 aa14.11□□□□□ -0.15
SCN3B-201ENST00000299333 RFXAPO00287 272 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 NPC1O15118 1278 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 RAD1O60671 282 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 TNFSF8P32971 234 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 TAS2R31P59538 309 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 RCAN2Q14206 197 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 METTL2BQ6P1Q9 378 aaKnown RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 SLC22A25Q6T423 547 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 IDO2Q6ZQW0 420 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 GPR155Q7Z3F1 870 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 OR1S1Q8NH92 325 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 ACOT11Q8WXI4 607 aaPredicted RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 TFAP2CQ92754 450 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF681Q96N22 645 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 UHRF1Q96T88 793 aaPredicted RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 UGT2A1Q9Y4X1 527 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 PCDHGA5Q9Y5G8 931 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 TP53P04637 393 aaPredicted RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 RAB7AP51149 207 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF84P51523 738 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 KEAP1Q14145 624 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 MEX3BQ6ZN04 569 aaKnown RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 ZNF546Q86UE3 836 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 NPAS4Q8IUM7 802 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 UEVLDQ8IX04 471 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 ANKRD53Q8N9V6 530 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 RCBTB1Q8NDN9 531 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 B3GNT7Q8NFL0 401 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 OR51T1Q8NGJ9 327 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 BTBD2Q9BX70 525 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 PATZ1Q9HBE1 687 aaKnown RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 ACOT7O00154 380 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 SCAMP2O15127 329 aaKnown RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 AQP9O43315 295 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 GKP32189 559 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 SORDQ00796 357 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 EMX1Q04741 257 aaPredicted RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 MBTPS1Q14703 1052 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 EMC10Q5UCC4 262 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 PLAG1Q6DJT9 500 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 OR52B6Q8NGF0 335 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 MAPK15Q8TD08 544 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 GLYATL1Q969I3 302 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 ELP4Q96EB1 424 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 PITX2Q99697 317 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 SLC30A3Q99726 388 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 LIPT1Q9Y234 373 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 UNCXA6NJT0 531 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 C1GALT1C1LP0DN25 315 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 T-ENOLP0DO92 83 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 HLA-FP30511 346 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 IL13RA1P78552 427 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 SERINC3Q13530 473 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 PLEKHS1Q5SXH7 462 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 PGAP1Q75T13 922 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 FNDC9Q8TBE3 224 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 NANPQ8TBE9 248 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 ZBTB8AQ96BR9 441 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 CNTNAP3Q9BZ76 1288 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 SMOC2Q9H3U7 446 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 FBXO24O75426 580 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 GGT2P36268 569 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 CX3CR1P49238 355 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 EIF4HQ15056 248 aaKnown RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 C2orf27AQ580R0 203 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 TXNDC8Q6A555 127 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 SLC18B1Q6NT16 456 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 DBF4BQ8NFT6 615 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 AKR7LQ8NHP1 331 aa14.1□□□□□ -0.15
SCN3B-201ENST00000299333 SPRYD4Q8WW59 207 aaPredicted RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 FOXRED1Q96CU9 486 aaPredicted RBP14.1□□□□□ -0.15
SCN3B-201ENST00000299333 TMEM19Q96HH6 336 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms