RNA–Protein interactions for RNA: ENST00000294172.6

NXF1-201, Transcript of nuclear RNA export factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXF1, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-201ENST00000294172 CKMT1AP12532 417 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 IFNGR2P38484 337 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 LARS2Q15031 903 aaKnown RBP13.06□□□□□ -0.32
NXF1-201ENST00000294172 SNAPC1Q16533 368 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 ZNF836Q6ZNA1 936 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 DCDC5Q6ZRR9 648 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 BTLAQ7Z6A9 289 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 KIF18BQ86Y91 864 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 NKAIN4Q8IVV8 208 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 CENPSQ8N2Z9 138 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 PPP1R14BQ96C90 147 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 MSANTD3Q96H12 275 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 MGLLQ99685 303 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 CHCHD6Q9BRQ6 235 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 PHF7Q9BWX1 381 aaPredicted RBP13.06□□□□□ -0.32
NXF1-201ENST00000294172 TSSK6Q9BXA6 273 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 SEMA6CQ9H3T2 930 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 DSN1Q9H410 356 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 RNF167Q9H6Y7 350 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 RPL36Q9Y3U8 105 aaKnown RBP13.06□□□□□ -0.32
NXF1-201ENST00000294172 CBFA2T3O75081 653 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 ATP1B1P05026 303 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 ALOX5P09917 674 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 GSTM3P21266 225 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 ZNF91Q05481 1191 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 GAS6Q14393 721 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 ZNF846Q147U1 533 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 TSTQ16762 297 aaKnown RBP13.06□□□□□ -0.32
NXF1-201ENST00000294172 CLEC12AQ5QGZ9 265 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 TMEM201Q5SNT2 666 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 MANEAQ5SRI9 462 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 FHL5Q5TD97 284 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 IGFN1Q86VF2 1251 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 GJD3Q8N144 294 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 COX18Q8N8Q8 333 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 AVL9Q8NBF6 648 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 TEX47Q8TBZ9 253 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 GNPDA2Q8TDQ7 276 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 GPR151Q8TDV0 419 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 VMP1Q96GC9 406 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 TMEM80Q96HE8 168 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 LRR1Q96L50 414 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 ORAI3Q9BRQ5 295 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 PIGUQ9H490 435 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 HMG20AQ9NP66 347 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 PALMDQ9NP74 551 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 GPR27Q9NS67 375 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 FBXO34Q9NWN3 711 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 CLEC2DQ9UHP7 191 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 OSGIN1Q9UJX0 560 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 POMT2Q9UKY4 750 aa13.06□□□□□ -0.32
NXF1-201ENST00000294172 NPIPA5A0A0B4J1W7 369 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 IGHV1OR15-9A0A0B4J2B8 117 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 SLC9B1P1A6NJY1 282 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 NPIPA7E9PJI5 369 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 CT62P0C5K7 136 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 NPIPA8P0DM63 369 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 ATXN8OSP0DMR3 200 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 DBTP11182 482 aaKnown RBP13.05□□□□□ -0.32
NXF1-201ENST00000294172 PIPP12273 146 aaPredicted RBP13.05□□□□□ -0.32
NXF1-201ENST00000294172 MAOBP27338 520 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 RFX3P48380 749 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 SMSP52788 366 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 SRSF5Q13243 272 aaKnown RBP13.05□□□□□ -0.32
NXF1-201ENST00000294172 SMAD4Q13485 552 aaKnown RBP13.05□□□□□ -0.32
NXF1-201ENST00000294172 TDGQ13569 410 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 DCST2Q5T1A1 773 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 MFSD4BQ5TF39 518 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 FIGNL1Q6PIW4 674 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 C19orf47Q8N9M1 422 aaKnown RBP13.05□□□□□ -0.32
NXF1-201ENST00000294172 SLC41A3Q96GZ6 507 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 POLDIP3Q9BY77 421 aaKnown RBP13.05□□□□□ -0.32
NXF1-201ENST00000294172 SLIRPQ9GZT3 109 aaKnown RBP13.05□□□□□ -0.32
NXF1-201ENST00000294172 ANKHQ9HCJ1 492 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 PRDM9Q9NQV7 894 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 DOLKQ9UPQ8 538 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 ERGIC3Q9Y282 383 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 UBXN7O94888 489 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 THY1P04216 161 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 CSTF2P33240 577 aaKnown RBP eCLIP13.05□□□□□ -0.32
NXF1-201ENST00000294172 BMP8BP34820 402 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 RPS3AP61247 264 aaKnown RBP13.05□□□□□ -0.32
NXF1-201ENST00000294172 CDK5Q00535 292 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 DOC2BQ14184 412 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 MAPK14Q16539 360 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 PRICKLE4Q2TBC4 344 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 GDF7Q7Z4P5 450 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 GALNT12Q8IXK2 581 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 NRMQ8IXM6 262 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 PIGXQ8TBF5 258 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 TMEM255BQ8WV15 326 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 NR4A3Q92570 626 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 CENPOQ9BU64 300 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 SAP130Q9H0E3 1048 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 MAT2BQ9NZL9 334 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 GPR52Q9Y2T5 361 aa13.05□□□□□ -0.32
NXF1-201ENST00000294172 SDK1Q7Z5N4 2213 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 A0A0A6YYC8 382 aaPredicted RBP13.04□□□□□ -0.32
NXF1-201ENST00000294172 AGAP5A6NIR3 686 aa13.04□□□□□ -0.32
NXF1-201ENST00000294172 I3L1I5 382 aaPredicted RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms