RNA–Protein interactions for RNA: ENST00000293780.4

CHRNE-201, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNE, Length 2,455 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-201ENST00000293780 NUP43Q8NFH3 380 aa15.78■□□□□ 0.12
CHRNE-201ENST00000293780 PAWRQ96IZ0 340 aaKnown RBP15.78■□□□□ 0.12
CHRNE-201ENST00000293780 ARHGDIGQ99819 225 aa15.78■□□□□ 0.12
CHRNE-201ENST00000293780 ZNF649Q9BS31 505 aa15.78■□□□□ 0.12
CHRNE-201ENST00000293780 PITHD1Q9GZP4 211 aaPredicted RBP15.78■□□□□ 0.12
CHRNE-201ENST00000293780 SLC6A20Q9NP91 592 aa15.78■□□□□ 0.12
CHRNE-201ENST00000293780 PRSS16Q9NQE7 514 aa15.78■□□□□ 0.12
CHRNE-201ENST00000293780 MDC1Q14676 2089 aaKnown RBP15.78■□□□□ 0.12
CHRNE-201ENST00000293780 OR52A4PA6NMU1 304 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 ATP5A1P25705 553 aaKnown RBP15.77■□□□□ 0.12
CHRNE-201ENST00000293780 LCN1P1Q5VSP4 162 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 AADACL4Q5VUY2 407 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 RRM2BQ7LG56 351 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 FBXL6Q8N531 539 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 SPPL3Q8TCT6 385 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 SPRYD4Q8WW59 207 aaPredicted RBP15.77■□□□□ 0.12
CHRNE-201ENST00000293780 JPH3Q8WXH2 748 aaPredicted RBP15.77■□□□□ 0.12
CHRNE-201ENST00000293780 ZNF707Q96C28 371 aaPredicted RBP15.77■□□□□ 0.12
CHRNE-201ENST00000293780 SOSTQ9BQB4 213 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 SLC13A4Q9UKG4 626 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 CES1P1Q9UKY3 287 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 CSNK1G3Q9Y6M4 447 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 CLCA3PQ9Y6N3 262 aa15.77■□□□□ 0.12
CHRNE-201ENST00000293780 IRGMA1A4Y4 181 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 TBC1D3BA6NDS4 549 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 GABRPO00591 440 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 SURF4O15260 269 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 PSKH1P11801 424 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 PRKCAP17252 672 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 RAB28P51157 221 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 PPP3R1P63098 170 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 TGM3Q08188 693 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 IL18Q14116 193 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 GNA13Q14344 377 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 QPRTQ15274 297 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 FAM209AQ5JX71 171 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 C1orf53Q5VUE5 145 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 MRM1Q6IN84 353 aaKnown RBP15.77■□□□□ 0.11
CHRNE-201ENST00000293780 DGLUCYQ7Z3D6 616 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 C12orf76Q8N812 135 aaPredicted RBP15.77■□□□□ 0.11
CHRNE-201ENST00000293780 POGLUT1Q8NBL1 392 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 SFXN5Q8TD22 340 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 ZFPM2Q8WW38 1151 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 SUSD6Q92537 303 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 KIAA1143Q96AT1 154 aaPredicted RBP15.77■□□□□ 0.11
CHRNE-201ENST00000293780 MRPS30Q9NP92 439 aaKnown RBP15.77■□□□□ 0.11
CHRNE-201ENST00000293780 ENTPD4Q9Y227 616 aa15.77■□□□□ 0.11
CHRNE-201ENST00000293780 SOCS6O14544 535 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 EFCAB14O75071 495 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 CCNYL3P0C7X3 344 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 DRD3P35462 400 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 IFNGR2P38484 337 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 WASP42768 502 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 CLDN2P57739 230 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 SNAP47Q5SQN1 464 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 VASNQ6EMK4 673 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 BHLHB9Q6PI77 547 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 NRMQ8IXM6 262 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 C19orf18Q8NEA5 215 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 OR56A1Q8NGH5 318 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 PIGXQ8TBF5 258 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 TMEM255BQ8WV15 326 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 OTULINQ96BN8 352 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 CXXC1Q9P0U4 656 aaPredicted RBP15.76■□□□□ 0.11
CHRNE-201ENST00000293780 FAM183AA6NL82 134 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 EMC8O43402 210 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 PAK4O96013 591 aaPredicted RBP15.76■□□□□ 0.11
CHRNE-201ENST00000293780 F3P13726 295 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 MAP2K3P46734 347 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 PDX1P52945 283 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 ST3GAL3Q11203 375 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 TATDN3Q17R31 274 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 TMEM35AQ53FP2 167 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 C6orf132Q5T0Z8 1188 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 TRIQKQ629K1 86 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 SLC48A1Q6P1K1 146 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 PRR23CQ6ZRP0 262 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 KLBQ86Z14 1044 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 TMEM145Q8NBT3 493 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 SIMC1Q8NDZ2 872 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 NEIL3Q8TAT5 605 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 ELP4Q96EB1 424 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 SECISBP2Q96T21 854 aaKnown RBP15.76■□□□□ 0.11
CHRNE-201ENST00000293780 HDAC8Q9BY41 377 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 ISG20L2Q9H9L3 353 aaKnown RBP15.76■□□□□ 0.11
CHRNE-201ENST00000293780 SPHK1Q9NYA1 384 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 NLKQ9UBE8 527 aa15.76■□□□□ 0.11
CHRNE-201ENST00000293780 APOBEC3BQ9UH17 382 aaKnown RBP15.76■□□□□ 0.11
CHRNE-201ENST00000293780 MUC22E2RYF6 1773 aaPredicted RBP15.76■□□□□ 0.11
CHRNE-201ENST00000293780 C1QTNF3-AMACRE9PGA6 284 aa15.75■□□□□ 0.11
CHRNE-201ENST00000293780 MID1O15344 667 aa15.75■□□□□ 0.11
CHRNE-201ENST00000293780 ALX3O95076 343 aa15.75■□□□□ 0.11
CHRNE-201ENST00000293780 CSNK2A2P19784 350 aaPredicted RBP15.75■□□□□ 0.11
CHRNE-201ENST00000293780 EVX1P49640 407 aa15.75■□□□□ 0.11
CHRNE-201ENST00000293780 ANXA11P50995 505 aaKnown RBP15.75■□□□□ 0.11
CHRNE-201ENST00000293780 CTBP2P56545 445 aa15.75■□□□□ 0.11
CHRNE-201ENST00000293780 SNRPNP63162 240 aaKnown RBP15.75■□□□□ 0.11
CHRNE-201ENST00000293780 FZD5Q13467 585 aa15.75■□□□□ 0.11
CHRNE-201ENST00000293780 FAM214AQ32MH5 1076 aa15.75■□□□□ 0.11
CHRNE-201ENST00000293780 CCDC58Q4VC31 144 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms