RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CISD3P0C7P0 127 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 GP1BBP13224 206 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 OSMP13725 252 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 TCEA1P23193 301 aaKnown RBP11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZXDBP98169 803 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 GNMTQ14749 295 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 UBE2UQ5VVX9 321 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 METTL11BQ5VVY1 283 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 THAP4Q8WY91 577 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 ISG20Q96AZ6 181 aaKnown RBP11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 MOCOSQ96EN8 888 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 KLHL9Q9P2J3 617 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 B4GALT6Q9UBX8 382 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 A0A0G2JMP0 313 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 NAP1L6A6NFF2 107 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 TFAP2AP05549 437 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR12D1P0DN82 309 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 CDKN2CP42773 168 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 ART1P52961 327 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 INHBCP55103 352 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 CDKN2DP55273 166 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 CDK10Q15131 360 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 SF3A2Q15428 464 aaKnown RBP11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 ODF4Q2M2E3 257 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 TMEM205Q6UW68 189 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR4M2Q8NGB6 313 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR6C4Q8NGE1 309 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 FRS2Q8WU20 508 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 HERPUD2Q9BSE4 406 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 DHRS4Q9BTZ2 278 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 ATG5Q9H1Y0 275 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 KCNK13Q9HB14 408 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 RIMS3Q9UJD0 308 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 PCTPQ9UKL6 214 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZCWPW2A0A1B0GU75 182 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 TTC34A8MYJ7 566 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 FAM72CH0Y354 149 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 JRKO75564 520 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 FHP07954 510 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF33BQ06732 778 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 CYP27C1Q4G0S4 372 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 RNASE10Q5GAN6 216 aaKnown RBP11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 FAM72AQ5TYM5 149 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 FAM72DQ6L9T8 149 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 FAM72BQ86X60 149 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 PRSS58Q8IYP2 241 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 GTPBP8Q8N3Z3 284 aaPredicted RBP11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR4K14Q8NGD5 310 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR52B6Q8NGF0 335 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR14K1Q8NGZ2 314 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 NDNFQ8TB73 568 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 PHOSPHO1Q8TCT1 267 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 HCAR2Q8TDS4 363 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZFP90Q8TF47 636 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLC30A3Q99726 388 aa11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 MARCH4Q9P2E8 410 aaPredicted RBP11.2□□□□□ -0.62
SYNGAP1-201ENST00000293748 PRRT4C9JH25 899 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 NRG2O14511 850 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SFTPBP07988 381 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF8P17098 575 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 PRKACAP17612 351 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 CD6P30203 668 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLC5A2P31639 672 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 ADH7P40394 386 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 POU6F2P78424 691 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 ZNF528Q3MIS6 628 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 ARHGAP11AQ6P4F7 1023 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 DCP2Q8IU60 420 aaKnown RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 TMEM105Q8N8V8 129 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SYT14Q8NB59 555 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR52N2Q8NGI0 321 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR6Q1Q8NGQ2 317 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR8K3Q8NH51 312 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 URM1Q9BTM9 101 aaKnown RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLC6A16Q9GZN6 736 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 OR10A4Q9H209 315 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 F5P12259 2224 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 EMC8O43402 210 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SC5DO75845 299 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 C8orf89P0DMQ9 161 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 MAT2AP31153 395 aaKnown RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 HOXC12P31275 282 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 UQCRC1P31930 480 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 WNT4P56705 351 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 UGT3A2Q3SY77 523 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 LYSMD4Q5XG99 296 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 TRNP1Q6NT89 227 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 C6orf120Q7Z4R8 191 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 AVL9Q8NBF6 648 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SORT1Q99523 831 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 C17orf62Q9BQA9 187 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 DPH2Q9BQC3 489 aaPredicted RBP11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 MROQ9BYG7 248 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 ABCG4Q9H172 646 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 NT5DC2Q9H857 520 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 SLCO3A1Q9UIG8 710 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 HS3ST2Q9Y278 367 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 A0A0D9SEW6 157 aa11.19□□□□□ -0.62
SYNGAP1-201ENST00000293748 GXYLT2A0PJZ3 443 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms