RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TRAPPC13A5PLN9 417 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 H3BQ06 376 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 I3L1I5 382 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 ZNF623O75123 536 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 CTSAP10619 480 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 SMAD2Q15796 467 aaKnown RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 KIAA0895LQ68EN5 471 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 TMEM205Q6UW68 189 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 OR5H2Q8NGV7 314 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 GLYATL2Q8WU03 294 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 ARL6Q9H0F7 186 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 SLC25A18Q9H1K4 315 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 C12orf71A8MTZ7 269 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 FTCDNL1E5RQL4 147 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 ACOT7O00154 380 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 HOXB9P17482 250 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 HNRNPA2B1P22626 353 aaKnown RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 DNASE1P24855 282 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 THBS2P35442 1172 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 PBX2P40425 430 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 PIN1Q13526 163 aaPredicted RBP11.45□□□□□ -0.58
COL8A1-201ENST00000261037 RAB33AQ14088 237 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 MICAQ29983 383 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 RHBDF1Q96CC6 855 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 MYRFLQ96LU7 910 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 SMIM14Q96QK8 99 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 KCNIP1Q9NZI2 227 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 KAT6AQ92794 2004 aa11.45□□□□□ -0.58
COL8A1-201ENST00000261037 TIMP1P01033 207 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 CAPNS1P04632 268 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 CAPN3P20807 821 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 SNRPD2P62316 118 aaKnown RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 EIF4HQ15056 248 aaKnown RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 PRAMEF8Q5VWM4 474 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 PRAMEF7Q5VXH5 474 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 HMBOX1Q6NT76 420 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 BAIAP2L2Q6UXY1 529 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 SLC16A9Q7RTY1 509 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 SCD5Q86SK9 330 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 S100PBPQ96BU1 408 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 MS4A4EQ96PG1 132 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 OR4K3Q96R72 315 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 ABCG5Q9H222 651 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 DMRT3Q9NQL9 472 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 MKS1Q9NXB0 559 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 SH3BGRL2Q9UJC5 107 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 ZCWPW2A0A1B0GU75 182 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 HMX3A6NHT5 357 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 ZNF217O75362 1048 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 RAC2P15153 192 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 PROZP22891 400 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 CTHP32929 405 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 OR7A5Q15622 319 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 GPR26Q8NDV2 337 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 OR2T4Q8NH00 348 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 SCRN2Q96FV2 425 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 C16orf58Q96GQ5 468 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 RETREG1Q9H6L5 497 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 PAQR5Q9NXK6 330 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 SOBPA7XYQ1 873 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 B8ZZF3 427 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 F5H5K5 113 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 SNNO75324 88 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 KNG1P01042 644 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 ENDOUP21128 410 aaKnown RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 AKR1C2P52895 323 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 PLGLAQ15195 96 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 HACD2Q6Y1H2 254 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 RNF175Q8N4F7 328 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 MARVELD2Q8N4S9 558 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 PAPOLGQ9BWT3 736 aaKnown RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 WDR6Q9NNW5 1121 aaKnown RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 MYNNQ9NPC7 610 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 SUSD2Q9UGT4 822 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 NAALAD2Q9Y3Q0 740 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 CSNK1G3Q9Y6M4 447 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 BOLA2-SMG1P6H3BVE0 249 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 PHYHO14832 338 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 ZNF14P17017 642 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 DRD5P21918 477 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 PSMB10P40306 273 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 FOLR3P41439 243 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 VEGFBP49765 207 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 CSNK2A1P68400 391 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 SNTB2Q13425 540 aaKnown RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 GSG1LQ6UXU4 331 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 CSNK2A3Q8NEV1 391 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 FBXO27Q8NI29 283 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 RHBDD1Q8TEB9 315 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 MYLIPQ8WY64 445 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 ST6GALNAC5Q9BVH7 336 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 IL26Q9NPH9 171 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 TRAV18A0A075B6X5 111 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 GPR39O43194 453 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 LCATP04180 440 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 EXOSC7Q15024 291 aaKnown RBP11.44□□□□□ -0.58
COL8A1-201ENST00000261037 ARHGAP12Q8IWW6 846 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 CPT1CQ8TCG5 803 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 ADAMTS18Q8TE60 1221 aa11.44□□□□□ -0.58
COL8A1-201ENST00000261037 NEIL2Q969S2 332 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms