RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 A0A0G2JPF8 293 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 LOC101059948A0A1B0GTJ6 334 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 DUXAA6NLW8 204 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 HNRNPCL2B2RXH8 293 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 HNRNPCL3B7ZW38 293 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 HRKO00198 91 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 MEN1O00255 615 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 E2F6O75461 281 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 ALPLP05186 524 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 FESP07332 822 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 HNRNPCL4P0DMR1 293 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 DLSTP36957 453 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 EFNA3P52797 238 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 ATAD3BQ5T9A4 648 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 ANKRD34AQ69YU3 496 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 RHBDD2Q6NTF9 364 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 COX15Q7KZN9 410 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 C16orf62Q7Z3J2 963 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 HMGN2P46Q86SG4 172 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 COMTD1Q86VU5 262 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 OR52R1Q8NGF1 315 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 MAGEE2Q8TD90 523 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-201ENST00000258962 HOXB13Q92826 284 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-201ENST00000258962 RIT1Q92963 219 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 LRFN5Q96NI6 719 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 DGAT2Q96PD7 388 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 ZNF300Q96RE9 604 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-201ENST00000258962 BARD1Q99728 777 aaKnown RBP16.21■□□□□ 0.19
SRSF1-201ENST00000258962 YIPF2Q9BWQ6 316 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 AMBRA1Q9C0C7 1298 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 PIGUQ9H490 435 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 KCND3Q9UK17 655 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 SRPK3Q9UPE1 567 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 SH3GLB1Q9Y371 365 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 MMACHCQ9Y4U1 282 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 SEC16AO15027 2179 aa16.21■□□□□ 0.19
SRSF1-201ENST00000258962 IGKV3D-11A0A0A0MRZ8 115 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 A8MVJ9 347 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 SERPINB7O75635 380 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 AGR2O95994 175 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 TCN2P20062 427 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 ALDH3A2P51648 485 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 PPP2R2BQ00005 443 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 CHRNEQ04844 493 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 BLMHQ13867 455 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 ZCCHC12Q6PEW1 402 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 SHQ1Q6PI26 577 aaKnown RBP16.2■□□□□ 0.18
SRSF1-201ENST00000258962 KRT73Q86Y46 540 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 APLFQ8IW19 511 aaPredicted RBP16.2■□□□□ 0.18
SRSF1-201ENST00000258962 MARVELD2Q8N4S9 558 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 CDRT4Q8N9R6 151 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 SLC38A9Q8NBW4 561 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 RBM18Q96H35 190 aaKnown RBP16.2■□□□□ 0.18
SRSF1-201ENST00000258962 OSBPL10Q9BXB5 764 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 SMURF2Q9HAU4 748 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 EXD2Q9NVH0 621 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 USE1Q9NZ43 259 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 CALML5Q9NZT1 146 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 SEC14L3Q9UDX4 400 aa16.2■□□□□ 0.18
SRSF1-201ENST00000258962 COQ9O75208 318 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 EPPINO95925 133 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 HPRP00739 348 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 ALOX5P09917 674 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 AGXTP21549 392 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 SSTR4P31391 388 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 SERTAD2Q14140 314 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 LAPTM4AQ15012 233 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 ARHGAP11BQ3KRB8 267 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 MLIPQ5VWP3 458 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 FAM199XQ6PEV8 388 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 FRRS1Q6ZNA5 592 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 QSOX2Q6ZRP7 698 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 HIPK1Q86Z02 1210 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 CHERPQ8IWX8 916 aaKnown RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 OR4D11Q8NGI4 311 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 SNRNP27Q8WVK2 155 aaKnown RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 RASSF5Q8WWW0 418 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 TSLPQ969D9 159 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 ZNF354BQ96LW1 612 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 PTCHD1Q96NR3 888 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 STACQ99469 402 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 WFDC6Q9BQY6 131 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 QRSL1Q9H0R6 528 aaKnown RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 GABARAPL1Q9H0R8 117 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 DUSP22Q9NRW4 184 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 SLC22A11Q9NSA0 550 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 SMPD3Q9NY59 655 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 SAMHD1Q9Y3Z3 626 aaKnown RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 ENPP4Q9Y6X5 453 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 ZNF891A8MT65 544 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 C21orf140B9A014 251 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 J3KTA2 159 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 FCMRO60667 390 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 DNAJB5O75953 348 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 FPR1P21462 350 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 PRKACGP22612 351 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 RRM2P31350 389 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 DNAJA1P31689 397 aaKnown RBP16.19■□□□□ 0.18
SRSF1-201ENST00000258962 GALNSP34059 522 aa16.19■□□□□ 0.18
SRSF1-201ENST00000258962 YAP1P46937 504 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms