RNA–Protein interactions for RNA: ENST00000258888.5

ALPK3-201, Transcript of alpha kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ALPK3, Length 10,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-201ENST00000258888 FKBP10Q96AY3 582 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 CWH43Q9H720 699 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 APOBEC3BQ9UH17 382 aaKnown RBP12.74□□□□□ -0.37
ALPK3-201ENST00000258888 FIBINQ8TAL6 211 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 TRMT10AQ8TBZ6 339 aaKnown RBP12.74□□□□□ -0.37
ALPK3-201ENST00000258888 TBC1D15Q8TC07 691 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 ACOT13Q9NPJ3 140 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 TMEM181Q9P2C4 612 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 AADACL4Q5VUY2 407 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 ADGRG5Q8IZF4 528 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 MS4A4EQ96PG1 132 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 MYEF2Q9P2K5 600 aaKnown RBP12.74□□□□□ -0.37
ALPK3-201ENST00000258888 CEP290O15078 2479 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 LRRTM2O43300 516 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 UNC5DQ6UXZ4 953 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 MS4A15Q8N5U1 240 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 SLC25A18Q9H1K4 315 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 EMCNQ9ULC0 261 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 F5P12259 2224 aa12.74□□□□□ -0.37
ALPK3-201ENST00000258888 LATS1O95835 1130 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 NSDHLQ15738 373 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 TMEM205Q6UW68 189 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 USP53Q70EK8 1073 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ANKK1Q8NFD2 765 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 DMRT3Q9NQL9 472 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 GPR39O43194 453 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 BATFQ16520 125 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 AWAT2Q6E213 333 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ARL14Q8N4G2 192 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 CD34P28906 385 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 SLC35F2Q8IXU6 374 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ASB15Q8WXK1 588 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 SLC7A7Q9UM01 511 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 LTBP3Q9NS15 1303 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 KIAA0355O15063 1070 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 COMMD7Q86VX2 200 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ZNF649Q9BS31 505 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 TMEM121BQ9BXQ6 578 aaPredicted RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 EIF5A2Q9GZV4 153 aaKnown RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ZNF225Q9UK10 706 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 JRKO75564 520 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 JMJD7P0C870 316 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 GPX3P22352 226 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 RNASE10Q5GAN6 216 aaKnown RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 CLLU1OSQ5K130 101 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 SCD5Q86SK9 330 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ZMYND19Q96E35 227 aaPredicted RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 DHRS4Q9BTZ2 278 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ACPTQ9BZG2 426 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 PELI2Q9HAT8 420 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 INTS6Q9UL03 887 aaKnown RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 IGKV6D-21A0A0A0MT36 114 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 SMAD6O43541 496 aaKnown RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 PTGER1P34995 402 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 B3GALNT1O75752 331 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ANKRD54Q6NXT1 300 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ARFGAP1Q8N6T3 406 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 PAPD5Q8NDF8 572 aaKnown RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 SLC17A9Q9BYT1 436 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 BTNL2Q9UIR0 455 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 BACE2Q9Y5Z0 518 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 DNMT3AQ9Y6K1 912 aaPredicted RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 OR5K4A6NMS3 321 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 RORAP35398 523 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 OR7G3Q8NG95 312 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 OR2T4Q8NH00 348 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 MMP28Q9H239 520 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 CXXC1Q9P0U4 656 aaPredicted RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ENDOUP21128 410 aaKnown RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 ZNF140P52738 457 aaPredicted RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 RNF151Q2KHN1 245 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 MAMDC4Q6UXC1 1216 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 TRIM46Q7Z4K8 759 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 TCEAL3Q969E4 200 aa12.73□□□□□ -0.37
ALPK3-201ENST00000258888 PELOQ9BRX2 385 aaKnown RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 DCAF13Q9NV06 445 aaKnown RBP12.73□□□□□ -0.37
ALPK3-201ENST00000258888 CNOT4O95628 575 aaKnown RBP12.72□□□□□ -0.37
ALPK3-201ENST00000258888 IFNA5P01569 189 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 RPS17P08708 135 aaKnown RBP12.72□□□□□ -0.37
ALPK3-201ENST00000258888 HNRNPA1P09651 372 aaKnown RBP eCLIP12.72□□□□□ -0.37
ALPK3-201ENST00000258888 ZNF888P0CJ79 500 aaPredicted RBP12.72□□□□□ -0.37
ALPK3-201ENST00000258888 SDC1P18827 310 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 GGT2P36268 569 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 ATAD3CQ5T2N8 411 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 SLC22A10Q63ZE4 541 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 PLAG1Q6DJT9 500 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 ZNF440Q8IYI8 595 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 NOTCH3Q9UM47 2321 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 WNT4P56705 351 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 RSU1Q15404 277 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 FIGLAQ6QHK4 219 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 FAM198BQ6UWH4 519 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 MAMDC2Q7Z304 686 aaPredicted RBP12.72□□□□□ -0.37
ALPK3-201ENST00000258888 CRYGNQ8WXF5 182 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 DEDD2Q8WXF8 326 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 PDLIM7Q9NR12 457 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 B3GALT1Q9Y5Z6 326 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 PIKFYVEQ9Y2I7 2098 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 VSTM2BA6NLU5 285 aa12.72□□□□□ -0.37
ALPK3-201ENST00000258888 LYRM1O43325 122 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms