RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 GALNT9Q9HCQ5 603 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 TRIM36Q9NQ86 728 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 PAK6Q9NQU5 681 aaPredicted RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 EIF3KQ9UBQ5 218 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 SLC7A7Q9UM01 511 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 SLC27A6Q9Y2P4 619 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ALG5Q9Y673 324 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ARID1AO14497 2285 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 PCM1Q15154 2024 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ATG2BQ96BY7 2078 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ZSCAN5BA6NJL1 495 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 DUXAA6NLW8 204 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 PRRT4C9JH25 899 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 I3L521 148 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 PSMD9O00233 223 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 GABRPO00591 440 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 KIAA0355O15063 1070 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 EMC8O43402 210 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 GREM1O60565 184 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 KHDRBS3O75525 346 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 PAHP00439 452 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 CD3GP09693 182 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ACP2P11117 423 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 CCL5P13501 91 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 TRIM23P36406 574 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 CRYBB2P43320 205 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 RAB28P51157 221 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 SNRPGP62308 76 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 FABP5Q01469 135 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 RPL6Q02878 288 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 RAB40BQ12829 278 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ZNF155Q12901 538 aaPredicted RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 ELOAQ14241 798 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 CDK10Q15131 360 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 NTRK2Q16620 822 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ODF4Q2M2E3 257 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 HNRNPA1L2Q32P51 320 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 PLK5Q496M5 336 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ZC3H14Q6PJT7 736 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 SLC39A5Q6ZMH5 540 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 PRICKLE2Q7Z3G6 844 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 NLRP8Q86W28 1048 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 NKAIN4Q8IVV8 208 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 LAS2Q8IYD9 372 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 TMEFF1Q8IYR6 380 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 TTLQ8NG68 377 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 OR4D11Q8NGI4 311 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 TMEM163Q8TC26 289 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 FANK1Q8TC84 345 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 CREB3L4Q8TEY5 395 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 SMAP2Q8WU79 429 aaPredicted RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 RERGQ96A58 199 aaPredicted RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 ZG16BQ96DA0 208 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 PAWRQ96IZ0 340 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 RAD9AQ99638 391 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 WFDC6Q9BQY6 131 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 SGPP1Q9BX95 441 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 PPIL3Q9H2H8 161 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 SRMSQ9H3Y6 488 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 KLHL31Q9H511 634 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 TMEM27Q9HBJ8 222 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 ZNF224Q9NZL3 707 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 USP36Q9P275 1121 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 DKK3Q9UBP4 350 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 DIMT1Q9UNQ2 313 aaKnown RBP4.46□□□□□ -1.7
USP44-201ENST00000258499 OR10H1Q9Y4A9 318 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 AP1M2Q9Y6Q5 423 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 CACNA1IQ9P0X4 2223 aa4.46□□□□□ -1.7
USP44-201ENST00000258499 TSC2P49815 1807 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SEC16AO15027 2179 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 B4DXG7 233 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 MEN1O00255 615 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 NRG2O14511 850 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 HYAL3O43820 417 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 FCMRO60667 390 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SEMA3DO95025 777 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 RPP14O95059 124 aaKnown RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 OLFM2O95897 454 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 CHRM4P08173 479 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 HIST1H1TP22492 207 aaPredicted RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 GRPRP30550 384 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 BMPR1AP36894 532 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 HSD17B2P37059 387 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ZNF81P51508 661 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ABATP80404 500 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 CDK3Q00526 305 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 PRSS53Q2L4Q9 553 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ENTPD8Q5MY95 495 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 FAM205BPQ63HN1 556 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 SAXO2Q658L1 398 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ARMC6Q6NXE6 501 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ENPP7Q6UWV6 458 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 KIAA1324Q6UXG2 1013 aaKnown RBP4.45□□□□□ -1.7
USP44-201ENST00000258499 FRRS1Q6ZNA5 592 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 DGLUCYQ7Z3D6 616 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 CAMKMTQ7Z624 323 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ABI3BPQ7Z7G0 1075 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ATCAYQ86WG3 371 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 OOSP2Q86WS3 158 aa4.45□□□□□ -1.7
USP44-201ENST00000258499 ADGRF3Q8IZF5 1079 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms