RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 LIMS4P0CW20 117 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 PRKACBP22694 351 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 RPS5P46782 204 aaKnown RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 PCBP3P57721 371 aaKnown RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 POU6F2P78424 691 aaPredicted RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 TOR1AIP1Q5JTV8 583 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 HENMT1Q5T8I9 393 aaKnown RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 FAM46CQ5VWP2 391 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ZNF770Q6IQ21 691 aaPredicted RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 KIF18BQ86Y91 864 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 TMEFF1Q8IYR6 380 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 PLA2G15Q8NCC3 412 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 KREMEN2Q8NCW0 462 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 SLAIN1Q8ND83 568 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 OR9A2Q8NGT5 310 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 PIGXQ8TBF5 258 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ADAMTS15Q8TE58 950 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 TMEM255BQ8WV15 326 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 UBE2E3Q969T4 207 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 NUS1Q96E22 293 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 MCHR1Q99705 422 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 GSDMCQ9BYG8 508 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 NARFLQ9H6Q4 476 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 BRD7Q9NPI1 651 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 KLHL28Q9NXS3 571 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ADAM30Q9UKF2 790 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 DIMT1Q9UNQ2 313 aaKnown RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 HS3ST2Q9Y278 367 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 LSM2Q9Y333 95 aaKnown RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 IQCMA0A1B0GVH7 501 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 PRAMEF27A3QJZ7 478 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ABLIM3O94929 683 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 SLC35G4P0C7Q5 338 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ZNF250P15622 560 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 SYN1P17600 705 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 PRLHRP49683 370 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 GPR176Q14439 515 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ZDHHC20Q5W0Z9 365 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 TPGS2Q68CL5 300 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 GPR135Q8IZ08 494 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ZFAND1Q8TCF1 268 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 RFT1Q96AA3 541 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ZNF689Q96CS4 500 aaPredicted RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 IFT27Q9BW83 186 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 FAIM2Q9BWQ8 316 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 SEMA4GQ9NTN9 838 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ACOXLQ9NUZ1 547 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 TAS2R7Q9NYW3 318 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 CHST2Q9Y4C5 530 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 A0A0A6YYJ9 748 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 NPC1O15118 1278 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 GREM1O60565 184 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 PROS1P07225 676 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 CLUP10909 449 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 C6P13671 934 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 SNRPBP14678 240 aaKnown RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 BMP7P18075 431 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 NAA10P41227 235 aaPredicted RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 AP2S1P53680 142 aaPredicted RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 RAB14P61106 215 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 SNRPGP62308 76 aaKnown RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 EEF1A2Q05639 463 aaKnown RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 DSG2Q14126 1118 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ZNF805Q5CZA5 627 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 Q6ZNB5 142 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 GDPGP1Q6ZNW5 385 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 SFTPA1Q8IWL2 248 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 RDH10Q8IZV5 341 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 SIPA1Q96FS4 1042 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 SENP5Q96HI0 755 aaPredicted RBP11.24□□□□□ -0.61
USHBP1-201ENST00000252597 RIPOR3Q96MK2 946 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 LYSMD1Q96S90 227 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 NPAP1Q9NZP6 1156 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 BACE2Q9Y5Z0 518 aa11.24□□□□□ -0.61
USHBP1-201ENST00000252597 ANKRD61A6NGH8 418 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 FAM171A2A8MVW0 826 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 ACP2P11117 423 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 PTHLHP12272 177 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 ZNF30P17039 623 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 CXCL3P19876 107 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 CLDN12P56749 244 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 CDC73Q6P1J9 531 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 TOMM5Q8N4H5 51 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 CCDC86Q9H6F5 360 aaKnown RBP11.23□□□□□ -0.61
USHBP1-201ENST00000252597 C6orf106Q9H6K1 298 aaPredicted RBP11.23□□□□□ -0.61
USHBP1-201ENST00000252597 USP36Q9P275 1121 aaKnown RBP11.23□□□□□ -0.61
USHBP1-201ENST00000252597 TRAPPC4Q9Y296 219 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 TEX13CA0A0J9YWL9 993 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 ALPPP05187 535 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 SRPRAP08240 638 aaKnown RBP11.23□□□□□ -0.61
USHBP1-201ENST00000252597 CERS1P27544 350 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 MLLT3P42568 568 aaPredicted RBP11.23□□□□□ -0.61
USHBP1-201ENST00000252597 LBX1P52954 281 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 TMEM163Q8TC26 289 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 RASSF5Q8WWW0 418 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 NEURL3Q96EH8 262 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 CACNG6Q9BXT2 260 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 NEUROD4Q9HD90 331 aa11.23□□□□□ -0.61
USHBP1-201ENST00000252597 ATP13A2Q9NQ11 1180 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms