RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 C11orf54Q9H0W9 315 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 OR51J1Q9H342 316 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 LYARQ9NX58 379 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF226Q9NYT6 803 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 GLTPQ9NZD2 209 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 EIF3KQ9UBQ5 218 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 NPFFR2Q9Y5X5 522 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ALG5Q9Y673 324 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TICRRQ7Z2Z1 1910 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 UPK3BL1B0FP48 263 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 UPK3BL2E5RIL1 263 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 BET1O15155 118 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TEX28O15482 410 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SULT1B1O43704 296 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PRICKLE3O43900 615 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CSO75390 466 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 MTRF1O75570 445 aaKnown RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SLC22A5O76082 557 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PDGFAP04085 211 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ELFN1P0C7U0 828 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SAGP10523 405 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 POU2F1P14859 743 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CSNK2A2P19784 350 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 EPHA2P29317 976 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 OR1D2P34982 312 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RAP2BP61225 183 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 FGL1Q08830 312 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 GAB1Q13480 694 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 C12orf73Q69YU5 71 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 C22orf39Q6P5X5 142 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 NXPE4Q6UWF7 544 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 FAM180AQ6UWF9 173 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 FAM198BQ6UWH4 519 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 LRRN1Q6UXK5 716 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CHRDL2Q6WN34 429 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RASSF6Q6ZTQ3 369 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PHC2Q8IXK0 858 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 FAM181AQ8N9Y4 354 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TP53I13Q8NBR0 393 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 VANGL1Q8TAA9 524 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 CD99L2Q8TCZ2 262 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SLC2A12Q8TD20 617 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ADAMTS15Q8TE58 950 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 NEURL3Q96EH8 262 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 OPALINQ96PE5 141 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PKP4Q99569 1192 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 SDHCQ99643 169 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM43Q9BTV4 400 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 TMEM27Q9HBJ8 222 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF304Q9HCX3 659 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RANGRFQ9HD47 186 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 RDH8Q9NYR8 311 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 STOX2Q9P2F5 926 aaPredicted RBP3.91□□□□□ -1.78
UBE4A-201ENST00000252108 HCFC2Q9Y5Z7 792 aa3.91□□□□□ -1.78
UBE4A-201ENST00000252108 PRUNE2Q8WUY3 3088 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 HEATR5BQ9P2D3 2071 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 A0A1W2PRQ8 180 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 GABRR3A8MPY1 467 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 KIAA0355O15063 1070 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 SHOXO15266 292 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 FLRT2O43155 660 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 KCNJ13O60928 360 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 RP2O75695 350 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 OPN1SWP03999 348 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 S100A9P06702 114 aaKnown RBP3.9□□□□□ -1.78
UBE4A-201ENST00000252108 ETFAP13804 333 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 DDCP20711 480 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 FCARP24071 287 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 IRS1P35568 1242 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 MNDAP41218 407 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 SSR2P43308 183 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 PRLHRP49683 370 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 ARFIP1P53367 373 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 TAS2R50P59544 299 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 RGS1Q08116 209 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 TSPAN31Q12999 210 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 RIN1Q13671 783 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 GANABQ14697 944 aaKnown RBP3.9□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF385BQ569K4 471 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 FAM46CQ5VWP2 391 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 DPPA4Q7L190 304 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 ASPGQ86U10 573 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 COMTD1Q86VU5 262 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 TRAPPC5Q8IUR0 188 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 DCUN1D3Q8IWE4 304 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 CLECL1Q8IZS7 167 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 OR6V1Q8N148 313 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF655Q8N720 491 aaPredicted RBP3.9□□□□□ -1.78
UBE4A-201ENST00000252108 HUS1BQ8NHY5 278 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 PMM1Q92871 262 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 NKD1Q969G9 470 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 CIDECQ96AQ7 238 aaPredicted RBP3.9□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF707Q96C28 371 aaPredicted RBP3.9□□□□□ -1.78
UBE4A-201ENST00000252108 OTUB2Q96DC9 234 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 ERLEC1Q96DZ1 483 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 PDXPQ96GD0 296 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 ST6GAL2Q96JF0 529 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 ZNF578Q96N58 590 aaPredicted RBP3.9□□□□□ -1.78
UBE4A-201ENST00000252108 FCRL4Q96PJ5 515 aa3.9□□□□□ -1.78
UBE4A-201ENST00000252108 GFM1Q96RP9 751 aaKnown RBP3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms