RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 SLAIN1Q8ND83 568 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 NSMAFQ92636 917 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 PMM1Q92871 262 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 GTPBP2Q9BX10 602 aaKnown RBP12.97□□□□□ -0.33
NFKB1-201ENST00000226574 RC3H2Q9HBD1 1191 aaKnown RBP12.97□□□□□ -0.33
NFKB1-201ENST00000226574 NOP16Q9Y3C1 178 aaKnown RBP12.97□□□□□ -0.33
NFKB1-201ENST00000226574 ALG5Q9Y673 324 aa12.97□□□□□ -0.33
NFKB1-201ENST00000226574 NRAPQ86VF7 1730 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 TRAV27A0A087WT01 109 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 EDDM13A0A1B0GTR0 161 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 H7C0S8 307 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 CRYZL1O95825 349 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 ECDO95905 644 aaPredicted RBP12.96□□□□□ -0.33
NFKB1-201ENST00000226574 CD2P06729 351 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 RAB3BP20337 219 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 SQSTM1Q13501 440 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 RAB33AQ14088 237 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 TMEM69Q5SWH9 247 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 AFMIDQ63HM1 303 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 SLC9B2Q86UD5 537 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 PTOV1Q86YD1 416 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 SLC41A3Q96GZ6 507 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 HYLS1Q96M11 299 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 BRF2Q9HAW0 419 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 AKIP1Q9NQ31 210 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 INIPQ9NRY2 104 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 AHDC1Q5TGY3 1603 aaPredicted RBP12.96□□□□□ -0.33
NFKB1-201ENST00000226574 FER1L6Q2WGJ9 1857 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 ANKRD34BA5PLL1 514 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 LDB3O75112 727 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 MT-ND4P03905 459 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 FKBP10Q96AY3 582 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 LGR4Q9BXB1 951 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 OR8D2Q9GZM6 311 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 LYARQ9NX58 379 aaKnown RBP12.96□□□□□ -0.33
NFKB1-201ENST00000226574 KLK4Q9Y5K2 254 aa12.96□□□□□ -0.33
NFKB1-201ENST00000226574 UNC119BA6NIH7 251 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 CENPBD1B2RD01 187 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 B4DGG1 531 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 ARPC5O15511 151 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 ZNF432O94892 652 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 FURINP09958 794 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 IGFBP4P22692 258 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 SHC1P29353 583 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 FXYD6P3P58550 94 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 KCNJ10P78508 379 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 MGAT3Q09327 533 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 AMZ1Q400G9 498 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 PRAMEF17Q5VTA0 474 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 ASB12Q8WXK4 309 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 EID2BQ96D98 161 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 ELMOD3Q96FG2 381 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 ACER3Q9NUN7 267 aa12.96□□□□□ -0.34
NFKB1-201ENST00000226574 NDRG2Q9UN36 371 aaKnown RBP12.96□□□□□ -0.34
NFKB1-201ENST00000226574 OR6C74A6NCV1 312 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 K7ESM1 405 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 PIP5K1CO60331 668 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 ADAMTS4O75173 837 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 HMGA1P17096 107 aaKnown RBP12.95□□□□□ -0.34
NFKB1-201ENST00000226574 AKT2P31751 481 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 ELAVL3Q14576 367 aaKnown RBP12.95□□□□□ -0.34
NFKB1-201ENST00000226574 BAK1Q16611 211 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 KLHL26Q53HC5 615 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 PRRT3Q5FWE3 981 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 NXNL2Q5VZ03 156 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 SLC16A12Q6ZSM3 486 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 SYT9Q86SS6 491 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 DEFB119Q8N690 84 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 NATD1Q8N6N6 113 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 ACOT4Q8N9L9 421 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 SDR9C7Q8NEX9 313 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 SMAP2Q8WU79 429 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-201ENST00000226574 TSACCQ96A04 125 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-201ENST00000226574 FOXN4Q96NZ1 517 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 TRIM2Q9C040 744 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 SLIRPQ9GZT3 109 aaKnown RBP12.95□□□□□ -0.34
NFKB1-201ENST00000226574 TRPV4Q9HBA0 871 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 CNOT2Q9NZN8 540 aaKnown RBP12.95□□□□□ -0.34
NFKB1-201ENST00000226574 STRCQ7RTU9 1775 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 PPM1DO15297 605 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 LIPCP11150 499 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 ADRB3P13945 408 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 HSD17B2P37059 387 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 LRIF1Q5T3J3 769 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 GDPGP1Q6ZNW5 385 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 ALOXE3Q9BYJ1 711 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 HRASLS2Q9NWW9 162 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 MLXQ9UH92 298 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 OR2AT4A6NND4 320 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 FABP7O15540 132 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 NPPBP16860 134 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 ACSM5Q6NUN0 579 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 LIMS2Q7Z4I7 341 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 COQ10AQ96MF6 247 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 ZNF471Q9BX82 626 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-201ENST00000226574 WSB2Q9NYS7 404 aaPredicted RBP12.95□□□□□ -0.34
NFKB1-201ENST00000226574 KCMF1Q9P0J7 381 aa12.95□□□□□ -0.34
NFKB1-201ENST00000226574 A0A1W2PQU0 124 aa12.94□□□□□ -0.34
NFKB1-201ENST00000226574 TMEM189-UBE2V1I3L0A0 370 aa12.94□□□□□ -0.34
NFKB1-201ENST00000226574 UPK1AO00322 258 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms