RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 ZMYND11Q15326 602 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 ZNF773Q6PK81 442 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 OR51Q1Q8NH59 317 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 NPRL2Q8WTW4 380 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 MYRFLQ96LU7 910 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 RDH12Q96NR8 316 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 OR4K3Q96R72 315 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 TM7SF3Q9NS93 570 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 PTTG2Q9NZH5 202 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 GABRR3A8MPY1 467 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 GNRHRP30968 328 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 C3orf38Q5JPI3 329 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 C19orf47Q8N9M1 422 aaKnown RBP17.41■□□□□ 0.38
CLIP2-201ENST00000223398 NANOS1Q8WY41 292 aaKnown RBP17.41■□□□□ 0.38
CLIP2-201ENST00000223398 HOXB13Q92826 284 aaPredicted RBP17.41■□□□□ 0.38
CLIP2-201ENST00000223398 KLHL21Q9UJP4 597 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 DUSP6Q16828 381 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 TLDC1Q6P9B6 456 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 LKAAEAR1Q8TD35 194 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 C15orf40Q8WUR7 153 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 TBC1D20Q96BZ9 403 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 ASB16Q96NS5 453 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 ZNF442Q9H7R0 627 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 MCTS1Q9ULC4 181 aaKnown RBP17.41■□□□□ 0.38
CLIP2-201ENST00000223398 DISC1C4P0D8 188 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 SNNO75324 88 aaPredicted RBP17.41■□□□□ 0.38
CLIP2-201ENST00000223398 LCATP04180 440 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 MANEAQ5SRI9 462 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 HS3ST5Q8IZT8 346 aa17.41■□□□□ 0.38
CLIP2-201ENST00000223398 INO80EQ8NBZ0 244 aaPredicted RBP17.41■□□□□ 0.38
CLIP2-201ENST00000223398 MITFO75030 526 aaPredicted RBP17.4■□□□□ 0.38
CLIP2-201ENST00000223398 OXSR1O95747 527 aaPredicted RBP17.4■□□□□ 0.38
CLIP2-201ENST00000223398 RPS17P08708 135 aaKnown RBP17.4■□□□□ 0.38
CLIP2-201ENST00000223398 TPMTP51580 245 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 CHRNEQ04844 493 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 BCL2L15Q5TBC7 163 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 C9orf135Q5VTT2 229 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 SLC18B1Q6NT16 456 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 OR9Q2Q8NGE9 314 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 TM9SF4Q92544 642 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 TAMM41Q96BW9 452 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 TCTN2Q96GX1 697 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 SYT11Q9BT88 431 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 PLEKHM1Q9Y4G2 1056 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 G3V3Y1 287 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 CD3GP09693 182 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 PRDX1Q06830 199 aaKnown RBP17.4■□□□□ 0.38
CLIP2-201ENST00000223398 EFR3AQ14156 821 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 SLC25A44Q96H78 314 aaPredicted RBP17.4■□□□□ 0.38
CLIP2-201ENST00000223398 DPAGT1Q9H3H5 408 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 RIMS3Q9UJD0 308 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 F5H5K5 113 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 CCRL2O00421 344 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 GFRA2O00451 464 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 ACPPP15309 386 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 TRAPPC6BQ86SZ2 158 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 ARMC1Q9NVT9 282 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 GLI3P10071 1580 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 NME4O00746 187 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 ZFAND5O76080 213 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 RASAL1O95294 804 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 ABCD2Q9UBJ2 740 aa17.4■□□□□ 0.38
CLIP2-201ENST00000223398 FXYD6-FXYD2A0A087WZ82 144 aa17.39■□□□□ 0.38
CLIP2-201ENST00000223398 HHLA1C9JL84 531 aa17.39■□□□□ 0.38
CLIP2-201ENST00000223398 MLC1Q15049 377 aa17.39■□□□□ 0.38
CLIP2-201ENST00000223398 CDK10Q15131 360 aa17.39■□□□□ 0.38
CLIP2-201ENST00000223398 CDKL4Q5MAI5 379 aa17.39■□□□□ 0.38
CLIP2-201ENST00000223398 ACOT12Q8WYK0 555 aa17.39■□□□□ 0.38
CLIP2-201ENST00000223398 THRSPQ92748 146 aa17.39■□□□□ 0.38
CLIP2-201ENST00000223398 FXYD6Q9H0Q3 95 aa17.39■□□□□ 0.38
CLIP2-201ENST00000223398 NUP50Q9UKX7 468 aa17.39■□□□□ 0.38
CLIP2-201ENST00000223398 APOC1P02654 83 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 HRGP04196 525 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 GPR18Q14330 331 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 C3orf33Q6P1S2 294 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 LINC00696Q6ZRV3 163 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF554Q86TJ5 538 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 SLC6A7Q99884 636 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 LINC01565O15544 149 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 PVALBP20472 110 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-201ENST00000223398 SOX3P41225 446 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 C22orf42Q6IC83 251 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 SLC45A3Q96JT2 553 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 EGLN2Q96KS0 407 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 FOXQ1Q9C009 403 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 SEC14L4Q9UDX3 406 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 CBLCQ9ULV8 474 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 SETD1AO15047 1707 aaKnown RBP17.39■□□□□ 0.37
CLIP2-201ENST00000223398 PKD1L3Q7Z443 1732 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 FUT1P19526 365 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 UGT8Q16880 541 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 PRAMEF20Q5VT98 475 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 MSANTD1Q6ZTZ1 278 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF775Q96BV0 537 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-201ENST00000223398 BPNT1O95861 308 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF791Q3KP31 576 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-201ENST00000223398 MYADMQ96S97 322 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 TWSG1Q9GZX9 223 aa17.39■□□□□ 0.37
CLIP2-201ENST00000223398 C6orf106Q9H6K1 298 aaPredicted RBP17.39■□□□□ 0.37
CLIP2-201ENST00000223398 MYEF2Q9P2K5 600 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms