RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 PRICKLE4Q2TBC4 344 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 PDCD4Q53EL6 469 aaKnown RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF628Q5EBL2 1059 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 SPANXN4Q5MJ08 99 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 FAM111BQ6SJ93 734 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF551Q7Z340 670 aaPredicted RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 CAMKMTQ7Z624 323 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 GALNT12Q8IXK2 581 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 C9orf40Q8IXQ3 194 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 CLECL1Q8IZS7 167 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 FAM9CQ8IZT9 166 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 LGI4Q8N135 537 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 CEP70Q8NHQ1 597 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF675Q8TD23 568 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 ELP5Q8TE02 316 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF721Q8TF20 911 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 C10orf82Q8WW14 230 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 ASB5Q8WWX0 329 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 KAT2AQ92830 837 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 RIT1Q92963 219 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 TESCQ96BS2 214 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 MTERF3Q96E29 417 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 SENP5Q96HI0 755 aaPredicted RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 FBXL20Q96IG2 436 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 C18orf12Q96KH6 178 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 BBS4Q96RK4 519 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 GPATCH1Q9BRR8 931 aaKnown RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 SIKE1Q9BRV8 207 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 PELOQ9BRX2 385 aaKnown RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 CNPPD1Q9BV87 410 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 DPY30Q9C005 99 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 FAM107BQ9H098 131 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 GLIPR2Q9H4G4 154 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 MMP25Q9NPA2 562 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 SDR39U1Q9NRG7 319 aaPredicted RBP6.81□□□□□ -1.32
PHGDH-225ENST00000641720 GIMAP4Q9NUV9 329 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 SH3BP4Q9P0V3 963 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 ERVK-19Q9WJR5 959 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 DTX4Q9Y2E6 619 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 CLCA3PQ9Y6N3 262 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF780BQ9Y6R6 833 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 TENM1Q9UKZ4 2725 aa6.81□□□□□ -1.32
PHGDH-225ENST00000641720 SYNDIG1LA6NDD5 238 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 PRRG2O14669 202 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 SHOX2O60902 331 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 SCN2BO60939 215 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF24P17028 368 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 TNNI3P19429 210 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 GPX3P22352 226 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 GALNSP34059 522 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 TRHRP34981 398 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 ADH7P40394 386 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 FRKP42685 505 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 MRPL19P49406 292 aaKnown RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 CLNS1AP54105 237 aaKnown RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 SLC37A1P57057 533 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 FUT7Q11130 342 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF267Q14586 743 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 PGS1Q32NB8 556 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 FAM174BQ3ZCQ3 159 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 TIGD2Q4W5G0 525 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 TRMT12Q53H54 448 aaKnown RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 CPTPQ5TA50 214 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 OR4F3Q6IEY1 312 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 SLC25A25Q6KCM7 469 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 POMZP3Q6PJE2 187 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 PAOXQ6QHF9 649 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 TMEM107Q6UX40 140 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 C16orf47Q6ZP98 133 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 SPATA21Q7Z572 469 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 R3HCC1LQ7Z5L2 792 aaKnown RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 ANKRD46Q86W74 232 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 CDC20BQ86Y33 519 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 CCDC116Q8IYX3 515 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 MIER2Q8N344 545 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 VWA5B2Q8N398 1253 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF615Q8N8J6 731 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 ZFP62Q8NB50 900 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 TMEM178AQ8NBL3 297 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 MORN4Q8NDC4 146 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 OR7G2Q8NG99 324 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 M1APQ8TC57 530 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 DAZLQ92904 295 aaKnown RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 CTHRC1Q96CG8 243 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 COQ8BQ96D53 544 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 VMP1Q96GC9 406 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 RBM18Q96H35 190 aaKnown RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 COX4I2Q96KJ9 171 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF354BQ96LW1 612 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 RILPQ96NA2 401 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 PCNX3Q9H6A9 2034 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 PLEKHF2Q9H8W4 249 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 SIRT3Q9NTG7 399 aaPredicted RBP6.8□□□□□ -1.32
PHGDH-225ENST00000641720 KLHL14Q9P2G3 628 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 ZNF639Q9UID6 485 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 PSME2Q9UL46 239 aa6.8□□□□□ -1.32
PHGDH-225ENST00000641720 A0A0G2JNJ9 132 aa6.79□□□□□ -1.32
PHGDH-225ENST00000641720 PINLYPA6NC86 204 aa6.79□□□□□ -1.32
PHGDH-225ENST00000641720 GMNCA6NCL1 334 aa6.79□□□□□ -1.32
PHGDH-225ENST00000641720 A8MUI8 341 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms