RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 MRPS30Q9NP92 439 aaKnown RBP13.71□□□□□ -0.22
SCARB2-221ENST00000640341 KLHL1Q9NR64 748 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 GRIP1Q9Y3R0 1128 aa13.71□□□□□ -0.22
SCARB2-221ENST00000640341 OBSL1O75147 1896 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 IQCMA0A1B0GVH7 501 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 SOCS6O14544 535 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 POLR1CO15160 346 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-221ENST00000640341 PLA2G10O15496 165 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 LGI1O95970 557 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 ACP2P11117 423 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 CPEP16870 476 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 PLK5Q496M5 336 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 TOR1AIP1Q5JTV8 583 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 XKRXQ6PP77 449 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 VWA5B2Q8N398 1253 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 MORN4Q8NDC4 146 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 SETD6Q8TBK2 473 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 TMEM163Q8TC26 289 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 TMEM255BQ8WV15 326 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 SPRYD4Q8WW59 207 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-221ENST00000640341 SLC7A6Q92536 515 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 SPATA5L1Q9BVQ7 753 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 DDX31Q9H8H2 851 aaKnown RBP13.7□□□□□ -0.22
SCARB2-221ENST00000640341 TRAPPC4Q9Y296 219 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 REV3LO60673 3130 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 A0A0B4J293 547 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 IGKV1-8A0A0C4DH67 115 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 EDDM13A0A1B0GTR0 161 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 A0A1W2PPV9 198 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 SNTNA6NMZ2 147 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 MID1O15344 667 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 AIFM1O95831 613 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 ALPPP05187 535 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 MRPL3P09001 348 aaKnown RBP13.7□□□□□ -0.22
SCARB2-221ENST00000640341 LIMS3P0CW19 117 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 LIMS4P0CW20 117 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 LRRC32Q14392 662 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 GPR68Q15743 365 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 CADM2Q8N3J6 435 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 ZNF614Q8N883 585 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 NUP43Q8NFH3 380 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 ZCCHC10Q8TBK6 192 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 DACT3Q96B18 629 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-221ENST00000640341 TRIM43Q96BQ3 446 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-221ENST00000640341 RNF31Q96EP0 1072 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 PAWRQ96IZ0 340 aaKnown RBP13.7□□□□□ -0.22
SCARB2-221ENST00000640341 AICDAQ9GZX7 198 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 UBXN7O94888 489 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 IFNA8P32881 189 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 SLC1A3P43003 542 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 BTN3A2P78410 334 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 COX10Q12887 443 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 GLYR1Q49A26 553 aaPredicted RBP13.7□□□□□ -0.22
SCARB2-221ENST00000640341 ZNF438Q7Z4V0 828 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 FBXL6Q8N531 539 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 SUN3Q8TAQ9 357 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 AP3S1Q92572 193 aa13.7□□□□□ -0.22
SCARB2-221ENST00000640341 TESQ9UGI8 421 aaKnown RBP13.7□□□□□ -0.22
SCARB2-221ENST00000640341 NPIPA5A0A0B4J1W7 369 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 A0A1W2PPK0 400 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 SHISA3A0PJX4 238 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 FAM172BPA6NC97 362 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 NPIPA7E9PJI5 369 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 NPIPA8P0DM63 369 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 REEP5Q00765 189 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 FAM27D1Q5T7N8 215 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 C1orf94Q6P1W5 598 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 CPOQ8IVL8 374 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 RAB42Q8N4Z0 105 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 KCT2Q8NC54 265 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 ADAMTS15Q8TE58 950 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 OR7D2Q96RA2 312 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 OR51V1Q9H2C8 321 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 WDR26Q9H7D7 661 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 PAK6Q9NQU5 681 aaPredicted RBP13.69□□□□□ -0.22
SCARB2-221ENST00000640341 ZSCAN32Q9NX65 697 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 SPHK1Q9NYA1 384 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 ZFR2Q9UPR6 939 aaKnown RBP13.69□□□□□ -0.22
SCARB2-221ENST00000640341 MRPS7Q9Y2R9 242 aaKnown RBP13.69□□□□□ -0.22
SCARB2-221ENST00000640341 A0A1W2PP55 124 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 ZNF860A6NHJ4 632 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 IFI30P13284 250 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 EPHA5P54756 1037 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 CDK5Q00535 292 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 CDK10Q15131 360 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 MLF2Q15773 248 aaPredicted RBP13.69□□□□□ -0.22
SCARB2-221ENST00000640341 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.69□□□□□ -0.22
SCARB2-221ENST00000640341 METRNLQ641Q3 311 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 KRT74Q7RTS7 529 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 NOXA1Q86UR1 476 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 SLC16A11Q8NCK7 471 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 SAMD8Q96LT4 415 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 MCHR1Q99705 422 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 ISG20L2Q9H9L3 353 aaKnown RBP13.69□□□□□ -0.22
SCARB2-221ENST00000640341 CERS4Q9HA82 394 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 GIMAP4Q9NUV9 329 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 SERGEFQ9UGK8 458 aa13.69□□□□□ -0.22
SCARB2-221ENST00000640341 HMX3A6NHT5 357 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 MAN2B1O00754 1011 aa13.68□□□□□ -0.22
SCARB2-221ENST00000640341 REM1O75628 298 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms