RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 KLHL12Q53G59 568 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 SLC30A6Q6NXT4 461 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 C22orf39Q6P5X5 142 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 GPAT4Q86UL3 456 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 LRRC28Q86X40 367 aaPredicted RBP19.25■□□□□ 0.67
PMS1-222ENST00000639501 TDP1Q9NUW8 608 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 WBP1LQ9NX94 342 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 A0A087WUU8 490 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 ACP5P13686 325 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 CFL1P23528 166 aaKnown RBP19.25■□□□□ 0.67
PMS1-222ENST00000639501 GIFP27352 417 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 PTGER1P34995 402 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 CCT3P49368 545 aaKnown RBP19.25■□□□□ 0.67
PMS1-222ENST00000639501 ST3GAL2Q16842 350 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 TXNDC8Q6A555 127 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 RTL4Q6ZR62 310 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 MRGPREQ86SM8 312 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 ZNF687Q8N1G0 1237 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 MYLIPQ8WY64 445 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 HGDQ93099 445 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 WBP1Q96G27 269 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 RIOK2Q9BVS4 552 aaKnown RBP19.25■□□□□ 0.67
PMS1-222ENST00000639501 BEX1Q9HBH7 125 aa19.25■□□□□ 0.67
PMS1-222ENST00000639501 IRGMA1A4Y4 181 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 GPR171O14626 319 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 MMP20O60882 483 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 GAAP10253 952 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 ICAM2P13598 275 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 MAP2K6P52564 334 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 TAF12Q16514 161 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 CHMP1BQ7LBR1 199 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 PRICKLE2Q7Z3G6 844 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 LUZP2Q86TE4 346 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 OR4Q3Q8NH05 313 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 POF1BQ8WVV4 589 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 ZNF607Q96SK3 696 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 EFCAB11Q9BUY7 163 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 DLL4Q9NR61 685 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 IL20RAQ9UHF4 553 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 CBLCQ9ULV8 474 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 LIPT1Q9Y234 373 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 LAMA2P24043 3122 aaKnown RBP19.24■□□□□ 0.67
PMS1-222ENST00000639501 NUP210Q8TEM1 1887 aaPredicted RBP19.24■□□□□ 0.67
PMS1-222ENST00000639501 MYOFQ9NZM1 2061 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 SLC2A10O95528 541 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 C1orf105O95561 183 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 TBX6O95947 436 aaPredicted RBP19.24■□□□□ 0.67
PMS1-222ENST00000639501 IFNA7P01567 189 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 CD3GP09693 182 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 DNASE1P24855 282 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 SHC1P29353 583 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 PITPNBP48739 271 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 ZP1P60852 638 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 HSF2Q03933 536 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 SUZ12Q15022 739 aaKnown RBP19.24■□□□□ 0.67
PMS1-222ENST00000639501 HBMQ6B0K9 141 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 SLC8B1Q6J4K2 584 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 OAFQ86UD1 273 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 LRRC56Q8IYG6 542 aaPredicted RBP19.24■□□□□ 0.67
PMS1-222ENST00000639501 PIAS4Q8N2W9 510 aaPredicted RBP19.24■□□□□ 0.67
PMS1-222ENST00000639501 KLHL36Q8N4N3 616 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 C2orf73Q8N5S3 287 aaPredicted RBP19.24■□□□□ 0.67
PMS1-222ENST00000639501 ZBTB44Q8NCP5 570 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 FBXO15Q8NCQ5 510 aaPredicted RBP19.24■□□□□ 0.67
PMS1-222ENST00000639501 XAGE5Q8WWM1 108 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 WDR34Q96EX3 536 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 QRSL1Q9H0R6 528 aaKnown RBP19.24■□□□□ 0.67
PMS1-222ENST00000639501 KCNN2Q9H2S1 579 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 CLEC4MQ9H2X3 399 aaPredicted RBP19.24■□□□□ 0.67
PMS1-222ENST00000639501 DPAGT1Q9H3H5 408 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 RASD1Q9Y272 281 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 RWDD3Q9Y3V2 267 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 DYRK1BQ9Y463 629 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 PLXNA2O75051 1894 aa19.24■□□□□ 0.67
PMS1-222ENST00000639501 PLPP1O14494 284 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 EFCAB14O75071 495 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 TBXA2RP21731 343 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 HLA-FP30511 346 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 TRIM23P36406 574 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 PNLIPRP1P54315 467 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 SMARCD3Q6STE5 483 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 MS4A15Q8N5U1 240 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 SIRT6Q8N6T7 355 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 TOR1AIP2Q8NFQ8 470 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 OR5P2Q8WZ92 322 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 SMPDL3AQ92484 453 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 EXOSC8Q96B26 276 aaKnown RBP19.23■□□□□ 0.67
PMS1-222ENST00000639501 FAM46AQ96IP4 442 aaKnown RBP19.23■□□□□ 0.67
PMS1-222ENST00000639501 SYNDIG1Q9H7V2 258 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 PTGFRNQ9P2B2 879 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 MTCL1Q9Y4B5 1905 aaKnown RBP19.23■□□□□ 0.67
PMS1-222ENST00000639501 FRS3O43559 492 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 GALTP07902 379 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 GNSP15586 552 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 RPL6Q02878 288 aaKnown RBP19.23■□□□□ 0.67
PMS1-222ENST00000639501 AADACL4Q5VUY2 407 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 TMEM81Q6P7N7 255 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 ZNF322Q6U7Q0 402 aaPredicted RBP19.23■□□□□ 0.67
PMS1-222ENST00000639501 Q6ZVU0 165 aa19.23■□□□□ 0.67
PMS1-222ENST00000639501 IKBIPQ70UQ0 350 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms