RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 MDH1P40925 334 aaKnown RBP13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 CASP3P42574 277 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 DNASE1L1P49184 302 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 ATP4BP51164 291 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 DGKQP52824 942 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 PLGLB1Q02325 96 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 GAB1Q13480 694 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 TP53BP2Q13625 1128 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 RNFT1Q5M7Z0 435 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 SLC30A6Q6NXT4 461 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 CDC73Q6P1J9 531 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 MSANTD1Q6ZTZ1 278 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 WDR53Q7Z5U6 358 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 ANKRD46Q86W74 232 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 SLC16A11Q8NCK7 471 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 OR4N2Q8NGD1 307 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 GOT1L1Q8NHS2 421 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 GPR151Q8TDV0 419 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 SLC9A6Q92581 669 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 NTNG2Q96CW9 530 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 ZNF597Q96LX8 424 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 RILPQ96NA2 401 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 ADOQ96SZ5 270 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 ACTRT3Q9BYD9 372 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 METTL7AQ9H8H3 244 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 FGFR1OP2Q9NVK5 253 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 GPATCH2Q9NW75 528 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 SEC14L3Q9UDX4 400 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 FAF1Q9UNN5 650 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 TRIM33Q9UPN9 1127 aa13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.53□□□□□ -0.24
CDC42BPB-209ENST00000634889 EML6Q6ZMW3 1958 aa13.52□□□□□ -0.24
CDC42BPB-209ENST00000634889 RNF103-CHMP3A0A140T963 221 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 FAM234BA2RU67 622 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 C9JVG2 144 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 NPIPA5E9PKD4 350 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 ASNA1O43681 348 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 TRIM3O75382 744 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 IL33O95760 270 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 VIMP08670 466 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 UQCRC2P22695 453 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 GNLYP22749 145 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 ELAVL4P26378 380 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 RFC3P40938 356 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 ZFP36L2P47974 494 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 UQCRFS1P47985 274 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 POLR2JP52435 117 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 PPIAP62937 165 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 MRPL49Q13405 166 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 LASP1Q14847 261 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 DUSP5Q16690 384 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 PACS2Q86VP3 889 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 FAM109AQ8N4B1 249 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 TRIML2Q8N7C3 387 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 OR5AK3PQ8NH89 298 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 RFWD2Q8NHY2 731 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 RNF138Q8WVD3 245 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 JADE3Q92613 823 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 EFHD2Q96C19 240 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 THOC1Q96FV9 657 aaKnown RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 TMEM41AQ96HV5 264 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 PANX1Q96RD7 426 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 NODALQ96S42 347 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 OSBPL11Q9BXB4 747 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 PIGUQ9H490 435 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 ZDHHC11Q9H8X9 412 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 ZFP64Q9NPA5 681 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 TUBA8Q9NY65 449 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 B4GALT7Q9UBV7 327 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 DCTN4Q9UJW0 460 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 NPIPA1Q9UND3 350 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 PCDHGB3Q9Y5G1 929 aa13.52□□□□□ -0.25
CDC42BPB-209ENST00000634889 A0A0G2JND7 137 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 PRAMEF25A6NGN4 478 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 LRRC3CA6NJW4 275 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 HS6ST1O60243 411 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 UNC5CO95185 931 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 LCN1P31025 176 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 KCNC4Q03721 635 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 RBPJQ06330 500 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 RCAN2Q14206 197 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 SQLEQ14534 574 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 METTL21CQ5VZV1 264 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 BICRALQ6AI39 1079 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 PAOXQ6QHF9 649 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 GFRALQ6UXV0 394 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 GHDCQ8N2G8 530 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 COX18Q8N8Q8 333 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 OR9I1Q8NGQ6 314 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 FBXO30Q8TB52 745 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 MIPOL1Q8TD10 442 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 PIK3R3Q92569 461 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 RMND5BQ96G75 393 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 C16orf58Q96GQ5 468 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 G6PC3Q9BUM1 346 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 TSPAN10Q9H1Z9 355 aaPredicted RBP13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 RABEP2Q9H5N1 569 aa13.51□□□□□ -0.25
CDC42BPB-209ENST00000634889 ZNF703Q9H7S9 590 aaPredicted RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms