RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 MED25Q71SY5 747 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 TMEM179BQ7Z7N9 219 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 COMTD1Q86VU5 262 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ZDHHC21Q8IVQ6 265 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 TMEM151BQ8IW70 566 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 LGI4Q8N135 537 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC38A9Q8NBW4 561 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF675Q8TD23 568 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 RNF31Q96EP0 1072 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 VPS50Q96JG6 964 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 CCDC74BQ96LY2 380 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 OR7D2Q96RA2 312 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 TREX2Q9BQ50 279 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 DOHHQ9BU89 302 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 ACTRT3Q9BYD9 372 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC7A5P2Q9GIP4 190 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 EQTNQ9NQ60 294 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 DNAJB9Q9UBS3 223 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 CNOT11Q9UKZ1 510 aaKnown RBP8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 BAG5Q9UL15 447 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 SRPK3Q9UPE1 567 aa8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 MAGED1Q9Y5V3 778 aaPredicted RBP8.85□□□□□ -0.99
PDLIM5-223ENST00000627587 A0A1B0GX78 115 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 DUXAA6NLW8 204 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 HRKO00198 91 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 GNGT2O14610 69 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 DSCR3O14972 297 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 PLOD3O60568 738 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 MFN2O95140 757 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 CBX7O95931 251 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 FABP3P05413 133 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 FAM87AP0C7U9 286 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 NR2F1P10589 423 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 CD247P20963 164 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 MAOAP21397 527 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 FUT4P22083 530 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 CRISP3P54108 245 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 HSD17B7P56937 341 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 NRF1Q16656 503 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 DUSP7Q16829 419 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 CYP27C1Q4G0S4 372 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 COLEC12Q5KU26 742 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 ATAD3BQ5T9A4 648 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 PPP4R4Q6NUP7 873 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 ST13P4Q8IZP2 240 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 GALNT4Q8N4A0 578 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC16A11Q8NCK7 471 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 AGBL5Q8NDL9 886 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 GPR32P1Q8NGA4 272 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 TMBIM1Q969X1 311 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 RBM18Q96H35 190 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF597Q96LX8 424 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 ZNF607Q96SK3 696 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 WFDC6Q9BQY6 131 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 C9orf16Q9BUW7 83 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 DDA1Q9BW61 102 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 YIPF2Q9BWQ6 316 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 C8orf4Q9NR00 106 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 SLC22A11Q9NSA0 550 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 C19orf53Q9UNZ5 99 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 MAST4O15021 2626 aa8.84□□□□□ -0.99
PDLIM5-223ENST00000627587 DSPPQ9NZW4 1301 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 B4E171 279 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 PYCARD-AS1I3L0S3 204 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 hCG_2039718K7EN88 272 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 AGRPO00253 132 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SEMA7AO75326 666 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 DIRAS1O95057 198 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 EPPINO95925 133 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 AGR2O95994 175 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 ACP2P11117 423 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 ZNF23P17027 643 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 FBLP22087 321 aaKnown RBP8.83□□□□□ -1
PDLIM5-223ENST00000627587 CSTF2P33240 577 aaKnown RBP eCLIP8.83□□□□□ -12e-6■■□□□ 13.9
PDLIM5-223ENST00000627587 TSPAN7P41732 249 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 HSPA13P48723 471 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 PPP1R8Q12972 351 aaKnown RBP8.83□□□□□ -1
PDLIM5-223ENST00000627587 BIKQ13323 160 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 DSG2Q14126 1118 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 EXOSC7Q15024 291 aaKnown RBP8.83□□□□□ -1
PDLIM5-223ENST00000627587 ANKRD34AQ69YU3 496 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 HEPHL1Q6MZM0 1159 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 CDC73Q6P1J9 531 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 COX15Q7KZN9 410 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 PIWIL3Q7Z3Z3 882 aaKnown RBP8.83□□□□□ -1
PDLIM5-223ENST00000627587 VASH2Q86V25 355 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 KRT73Q86Y46 540 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 GALNT12Q8IXK2 581 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 HS3ST5Q8IZT8 346 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 VWA5B2Q8N398 1253 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 CBR4Q8N4T8 237 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 PACRGLQ8N7B6 248 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SMYD1Q8NB12 490 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 ADAMTS15Q8TE58 950 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 RASSF5Q8WWW0 418 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 HOXB13Q92826 284 aaPredicted RBP8.83□□□□□ -1
PDLIM5-223ENST00000627587 NKD1Q969G9 470 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 SLC35A4Q96G79 324 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 DGAT2Q96PD7 388 aa8.83□□□□□ -1
PDLIM5-223ENST00000627587 OR1F2PQ96R84 312 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms