RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ANGPT1Q15389 498 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 SOWAHCQ53LP3 525 aaPredicted RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 LAIR1Q6GTX8 287 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 SLC30A6Q6NXT4 461 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 DHRS13Q6UX07 377 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 KDM8Q8N371 416 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 OR5M1Q8NGP8 315 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 IFI44Q8TCB0 444 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 PHOSPHO1Q8TCT1 267 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 TMEM255BQ8WV15 326 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 JSRP1Q96MG2 331 aaPredicted RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 GPA33Q99795 319 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 FANCEQ9HB96 536 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ERVK-18Q9QC07 812 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 HEATR5AQ86XA9 2040 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 CYR61O00622 381 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ALPPP05187 535 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 TFAP2AP05549 437 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 SAGP10523 405 aaPredicted RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 RNH1P13489 461 aaKnown RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 DRD2P14416 443 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 ZNF28P17035 718 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 RPL3P39023 403 aaKnown RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 FAM214AQ32MH5 1076 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 DCST1Q5T197 706 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 PLXDC1Q8IUK5 500 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 CATSPER1Q8NEC5 780 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 C16orf52Q8NHV5 167 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 FAM131CQ96AQ9 280 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 CACYBPQ9HB71 228 aaKnown RBP9.81□□□□□ -0.84
VPS11-208ENST00000621676 SERTAD3Q9UJW9 196 aa9.81□□□□□ -0.84
VPS11-208ENST00000621676 EFCAB7A8K855 629 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 FAM20BO75063 409 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 ANGPTL1O95841 491 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 HSD11B2P80365 405 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 SIGLEC14Q08ET2 396 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 ZC3H12BQ5HYM0 836 aaKnown RBP9.8□□□□□ -0.84
VPS11-208ENST00000621676 MRPL2Q5T653 305 aaKnown RBP9.8□□□□□ -0.84
VPS11-208ENST00000621676 SAXO2Q658L1 398 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 OR52E8Q6IFG1 317 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 MRM1Q6IN84 353 aaKnown RBP9.8□□□□□ -0.84
VPS11-208ENST00000621676 KCTD8Q6ZWB6 473 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 NRMQ8IXM6 262 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 OR5K1Q8NHB7 308 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 SLC38A1Q9H2H9 487 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 MED20Q9H944 212 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 GPR83Q9NYM4 423 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 TMEFF2Q9UIK5 374 aaPredicted RBP9.8□□□□□ -0.84
VPS11-208ENST00000621676 C3orf18Q9UK00 162 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 PSMD9O00233 223 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 TLX2O43763 284 aaPredicted RBP9.8□□□□□ -0.84
VPS11-208ENST00000621676 ADAM11O75078 769 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 SCRG1O75711 98 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 RETP07949 1114 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 GLB1P16278 677 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 DNAJA1P31689 397 aaKnown RBP9.8□□□□□ -0.84
VPS11-208ENST00000621676 ATP6V1E1P36543 226 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 RAD23AP54725 363 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 TOMM20Q15388 145 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 ZNF630Q2M218 657 aaPredicted RBP9.8□□□□□ -0.84
VPS11-208ENST00000621676 ADPRMQ3LIE5 342 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 PMS2CLQ68D20 193 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 MFSD12Q6NUT3 480 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 PODNL1Q6PEZ8 512 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 CBLN3Q6UW01 205 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 SLC36A4Q6YBV0 504 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 TCEANCQ8N8B7 351 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 CADM4Q8NFZ8 388 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 BBS10Q8TAM1 723 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 TMEM203Q969S6 136 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 ANKRD9Q96BM1 317 aaPredicted RBP9.8□□□□□ -0.84
VPS11-208ENST00000621676 MBOAT4Q96T53 435 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 OSBPL10Q9BXB5 764 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.8□□□□□ -0.84
VPS11-208ENST00000621676 DPH1Q9BZG8 443 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 KCNE5Q9UJ90 142 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 SLC7A7Q9UM01 511 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 PLCL2Q9UPR0 1127 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 ENTPD2Q9Y5L3 495 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 MED13Q9UHV7 2174 aa9.8□□□□□ -0.84
VPS11-208ENST00000621676 TRAV27A0A087WT01 109 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 MAGEB4O15481 346 aaPredicted RBP9.79□□□□□ -0.84
VPS11-208ENST00000621676 WISP1O95388 367 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 SLC2A10O95528 541 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 ALOX5P09917 674 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 CD247P20963 164 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 CSTF2P33240 577 aaKnown RBP eCLIP9.79□□□□□ -0.84
VPS11-208ENST00000621676 CNR2P34972 360 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 PCGF2P35227 344 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 CLK3P49761 638 aaKnown RBP9.79□□□□□ -0.84
VPS11-208ENST00000621676 RPS3AP61247 264 aaKnown RBP9.79□□□□□ -0.84
VPS11-208ENST00000621676 KLHL12Q53G59 568 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 ERICH5Q6P6B1 374 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 CHERPQ8IWX8 916 aaKnown RBP9.79□□□□□ -0.84
VPS11-208ENST00000621676 UBALD2Q8IYN6 164 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 ZFP41Q8N8Y5 198 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 OR4K5Q8NGD3 323 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 PFN4Q8NHR9 129 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 MR1Q95460 341 aa9.79□□□□□ -0.84
VPS11-208ENST00000621676 CCDC74BQ96LY2 380 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms