RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CD70P32970 193 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 RNF144AP50876 292 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 CTSCP53634 463 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SYT14P1Q58G82 188 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 CCSAPQ6IQ19 270 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 C19orf48Q6RUI8 117 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 GDPD4Q6W3E5 623 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 FRRS1Q6ZNA5 592 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 RTL4Q6ZR62 310 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 RASSF6Q6ZTQ3 369 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PLCZ1Q86YW0 608 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 OR4D11Q8NGI4 311 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 TNFAIP8L1Q8WVP5 186 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 IL17FQ96PD4 163 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SPATA9Q9BWV2 254 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 RSPO3Q9BXY4 272 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 RETREG1Q9H6L5 497 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PHPT1Q9NRX4 125 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 CNIH4Q9P003 139 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 MRPL15Q9P015 296 aaKnown RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 B4GALT6Q9UBX8 382 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 KCNN3Q9UGI6 736 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 ZFR2Q9UPR6 939 aaKnown RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 LSM2Q9Y333 95 aaKnown RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 GRXCR1A8MXD5 290 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 ANHXE9PGG2 379 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PDPK1O15530 556 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 HYAL3O43820 417 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 UBL4AP11441 157 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 DDCP20711 480 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 ELAVL4P26378 380 aaKnown RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 MNDAP41218 407 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 GIPRP48546 466 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 AGFG1P52594 562 aaKnown RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 AP2S1P53680 142 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF763Q0D2J5 394 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SYPL1Q16563 259 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 CDONQ4KMG0 1287 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 REEP3Q6NUK4 255 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PGBD2Q6P3X8 592 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 OR6K6Q8NGW6 343 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 BBS10Q8TAM1 723 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 LINC01599Q8WXQ3 324 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 GPA33Q99795 319 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PLA2G12AQ9BZM1 189 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SPNS1Q9H2V7 528 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 CXorf36Q9H7Y0 433 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SLC25A19Q9HC21 320 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 STOX2Q9P2F5 926 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 EIF3KQ9UBQ5 218 aaKnown RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 BTNL2Q9UIR0 455 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 POLHQ9Y253 713 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 IRAK3Q9Y616 596 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 RP1P56715 2156 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SZT2Q5T011 3432 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SCN2AQ99250 2005 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 A0A0A6YYJ9 748 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 IL1AP01583 271 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 CXCL10P02778 98 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 CXCL3P19876 107 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PSMA3P25788 255 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 BNC1Q01954 994 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 RGS1Q08116 209 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 MLLT11Q13015 90 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 LIPJQ5W064 366 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 C22orf39Q6P5X5 142 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PODNL1Q6PEZ8 512 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 ZNF783Q6ZMS7 281 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 CHST14Q8NCH0 376 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 OR4K5Q8NGD3 323 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SMAP2Q8WU79 429 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 HERVK_113Q902F9 699 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 AKAP1Q92667 903 aaKnown RBP eCLIP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 UFD1Q92890 307 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SMARCD2Q92925 531 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 RIT1Q92963 219 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 UCN3Q969E3 161 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 RERGQ96A58 199 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 ARSGQ96EG1 525 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SENP5Q96HI0 755 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SLC35G5Q96KT7 338 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 C12orf66Q96MD2 445 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 SPATA6Q9NWH7 488 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 CXXC1Q9P0U4 656 aaPredicted RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 REV1Q9UBZ9 1251 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PPIEQ9UNP9 301 aaKnown RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PLXNB2O15031 1838 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 TPRP12270 2363 aaKnown RBP6.56□□□□□ -1.36
NEDD9-216ENST00000620854 OTOFQ9HC10 1997 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 PATJQ8NI35 1801 aa6.56□□□□□ -1.36
NEDD9-216ENST00000620854 MID1O15344 667 aa6.55□□□□□ -1.36
NEDD9-216ENST00000620854 RAB36O95755 333 aa6.55□□□□□ -1.36
NEDD9-216ENST00000620854 TP53P04637 393 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-216ENST00000620854 C8orf89P0DMQ9 161 aa6.55□□□□□ -1.36
NEDD9-216ENST00000620854 KELP23276 732 aa6.55□□□□□ -1.36
NEDD9-216ENST00000620854 WNT4P56705 351 aa6.55□□□□□ -1.36
NEDD9-216ENST00000620854 VSX2P58304 361 aaPredicted RBP6.55□□□□□ -1.36
NEDD9-216ENST00000620854 MRPL58Q14197 206 aaKnown RBP6.55□□□□□ -1.36
NEDD9-216ENST00000620854 ARSIQ5FYB1 569 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms