RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 VRK2Q86Y07 508 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 LINC01555Q8NAE3 123 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 ZG16BQ96DA0 208 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 KCNJ15Q99712 375 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 KLHL31Q9H511 634 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 NIPAL2Q9H841 368 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 TMA7Q9Y2S6 64 aaKnown RBP19.13■□□□□ 0.65
NEK3-208ENST00000618534 A0A0X1KG70 313 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 A0A1W2PS29 197 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 SURF4O15260 269 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 AKR7A2O43488 359 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 AKAP8O43823 692 aaKnown RBP19.13■□□□□ 0.65
NEK3-208ENST00000618534 INPP1P49441 399 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 SNRPD2P62316 118 aaKnown RBP19.13■□□□□ 0.65
NEK3-208ENST00000618534 TNK1Q13470 666 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 COL9A2Q14055 689 aaPredicted RBP19.13■□□□□ 0.65
NEK3-208ENST00000618534 DSG2Q14126 1118 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 TRAM2Q15035 370 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 SF3A2Q15428 464 aaKnown RBP19.13■□□□□ 0.65
NEK3-208ENST00000618534 BTBD16Q32M84 506 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 PIP5KL1Q5T9C9 394 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 TMEM107Q6UX40 140 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 B3GLCTQ6Y288 498 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 ANKRD33Q7Z3H0 272 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 KLHL36Q8N4N3 616 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 DIO2Q92813 273 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 MARVELD1Q9BSK0 173 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 C11orf49Q9H6J7 331 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 NT5DC2Q9H857 520 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 NTNG1Q9Y2I2 539 aa19.13■□□□□ 0.65
NEK3-208ENST00000618534 PGRMC2O15173 223 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 ARSBP15848 533 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 TRHRP34981 398 aaPredicted RBP19.12■□□□□ 0.65
NEK3-208ENST00000618534 EPHA5P54756 1037 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 TRA2BP62995 288 aaKnown RBP19.12■□□□□ 0.65
NEK3-208ENST00000618534 RIN1Q13671 783 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 PLCZ1Q86YW0 608 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 CCDC116Q8IYX3 515 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 DEDD2Q8WXF8 326 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 SMG7Q92540 1137 aaKnown RBP19.12■□□□□ 0.65
NEK3-208ENST00000618534 RFKQ969G6 155 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 COQ7Q99807 217 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 WACQ9BTA9 647 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 BTBD1Q9H0C5 482 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 PCBD2Q9H0N5 130 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 GALNT9Q9HCQ5 603 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 ING3Q9NXR8 418 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 IL20RAQ9UHF4 553 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 C4orf51C9J302 202 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 C8orf89P0DMQ9 161 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 GPR4P46093 362 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 VASPP50552 380 aaPredicted RBP19.12■□□□□ 0.65
NEK3-208ENST00000618534 RRAS2P62070 204 aaPredicted RBP19.12■□□□□ 0.65
NEK3-208ENST00000618534 GNA13Q14344 377 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 EOGTQ5NDL2 527 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 C9orf64Q5T6V5 341 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 MZT2AQ6P582 158 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 TMEM64Q6YI46 380 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 TRILQ7L0X0 811 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 RRM2BQ7LG56 351 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 PIGXQ8TBF5 258 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 DNAJA4Q8WW22 397 aaPredicted RBP19.12■□□□□ 0.65
NEK3-208ENST00000618534 SNAPC3Q92966 411 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 CNRIP1Q96F85 164 aaPredicted RBP19.12■□□□□ 0.65
NEK3-208ENST00000618534 CAMK1GQ96NX5 476 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 ARHGDIGQ99819 225 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 FAIM2Q9BWQ8 316 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 EQTNQ9NQ60 294 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 CREBZFQ9NS37 354 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 IRAK3Q9Y616 596 aa19.12■□□□□ 0.65
NEK3-208ENST00000618534 NOTCH4Q99466 2003 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 IGKV1-8A0A0C4DH67 115 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 LRIT2A6NDA9 550 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 PRRT4C9JH25 899 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 SGK494L7N484 410 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 ARHGEF9O43307 516 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 SLC43A1O75387 559 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 SLC2A10O95528 541 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 RPN2P04844 631 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 PTBP1P26599 531 aaKnown RBP eCLIP19.11■□□□□ 0.658e-14■■■□□ 15
NEK3-208ENST00000618534 ANXA11P50995 505 aaKnown RBP19.11■□□□□ 0.65
NEK3-208ENST00000618534 RAB25P57735 213 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 FNDC3BQ53EP0 1204 aaKnown RBP19.11■□□□□ 0.65
NEK3-208ENST00000618534 ZNF57Q68EA5 555 aaPredicted RBP19.11■□□□□ 0.65
NEK3-208ENST00000618534 TMEM91Q6ZNR0 172 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 KLBQ86Z14 1044 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 NKAIN4Q8IVV8 208 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 FAM20CQ8IXL6 584 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 ING5Q8WYH8 240 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 DEFB118Q96PH6 123 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 SLC38A1Q9H2H9 487 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 POLMQ9NP87 494 aaPredicted RBP19.11■□□□□ 0.65
NEK3-208ENST00000618534 SLC13A4Q9UKG4 626 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 CHST2Q9Y4C5 530 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 CHST10O43529 356 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 ORC5O43913 435 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 HSD17B2P37059 387 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 AGFG1P52594 562 aaKnown RBP19.11■□□□□ 0.65
NEK3-208ENST00000618534 OR8K5Q8NH50 307 aa19.11■□□□□ 0.65
NEK3-208ENST00000618534 OR8D1Q8WZ84 308 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms