RNA–Protein interactions for RNA: ENST00000617546.4

CUL4A-212, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 5,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-212ENST00000617546 DGAT2Q96PD7 388 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 NME7Q9Y5B8 376 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 MYH11P35749 1972 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 MAST2Q6P0Q8 1798 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 LOC105369274A0A096LPK9 316 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 MROH6A6NGR9 719 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ADAM12O43184 909 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 RNF13O43567 381 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 SSX5O60225 188 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 TBX18O95935 607 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 CSTBP04080 98 aaKnown RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 MRPL3P09001 348 aaKnown RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 PTH2RP49190 550 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 TAS2R19P59542 299 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 PITX1P78337 314 aaPredicted RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 TLE2Q04725 743 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 CRYZQ08257 329 aaKnown RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 INAVAQ3KP66 663 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ITPRIPL2Q3MIP1 535 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 PKDCCQ504Y2 493 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ZNF648Q5T619 568 aaPredicted RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 IFNL1Q8IU54 200 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 FUNDC1Q8IVP5 155 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 OR4N4Q8N0Y3 316 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 PXT1Q8NFP0 134 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 OR5AK2Q8NH90 309 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 LMLNQ96KR4 655 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 C1QTNF2Q9BXJ5 285 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 A8MU76 341 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 LATO43561 262 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 NARSO43776 548 aaKnown RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ARAFP10398 606 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 MAT2AP31153 395 aaKnown RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 S100A11P31949 105 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 NRG3P56975 720 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 LRRC37A5PQ49AS3 106 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 SPATC1Q76KD6 591 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 FAM122BQ7Z309 247 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 OR5D16Q8NGK9 328 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ZCCHC10Q8TBK6 192 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 SLCO4A1Q96BD0 722 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 C3orf49Q96BT1 292 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 MBOAT4Q96T53 435 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 CENPOQ9BU64 300 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 SLC22A11Q9NSA0 550 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 NDRG4Q9ULP0 352 aaKnown RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 SLC6A5Q9Y345 797 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 NPIPA5E9PKD4 350 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 GAPDHSO14556 408 aaPredicted RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 SDC3O75056 442 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 RBMXL2O75526 392 aaKnown RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 AHCYP23526 432 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ETV3P41162 512 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 MLLT10P55197 1068 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 TMEM115Q12893 351 aaPredicted RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 UPP1Q16831 310 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ACSM3Q53FZ2 586 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 RTL6Q6ICC9 239 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 LPCAT3Q6P1A2 487 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 FAM217AQ8IXS0 508 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 SLC35F2Q8IXU6 374 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 DNAJC5GQ8N7S2 189 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 OR2T4Q8NH00 348 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 OR52N1Q8NH53 320 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 OLIG1Q8TAK6 271 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 FOXRED1Q96CU9 486 aaPredicted RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 OTUB2Q96DC9 234 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ACPTQ9BZG2 426 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 RNF39Q9H2S5 420 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 PIGMQ9H3S5 423 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 OR6C2Q9NZP2 312 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 NPIPA1Q9UND3 350 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 A0A1W2PQ45 241 aaPredicted RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 A0A1W2PQY0 241 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ADAM23O75077 832 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 RAB3DO95716 219 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 F2P00734 622 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 PTHP01270 115 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 TCRBP04435 133 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 EPHX1P07099 455 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ADRB3P13945 408 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 TGM1P22735 817 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 GKP32189 559 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 CREB5Q02930 508 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.73□□□□□ -0.854e-6■□□□□ 9.4
CUL4A-212ENST00000617546 MEPCEQ7L2J0 689 aaKnown RBP9.73□□□□□ -0.85
CUL4A-212ENST00000617546 SSX6Q7RTT6 188 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 GPR135Q8IZ08 494 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ZFP41Q8N8Y5 198 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 ZNF454Q8N9F8 522 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 METTL21AQ8WXB1 218 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 TMEM41AQ96HV5 264 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 C10orf90Q96M02 699 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 SAP130Q9H0E3 1048 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 DPEP2Q9H4A9 486 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 APMAPQ9HDC9 416 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 MAFFQ9ULX9 164 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 RASD1Q9Y272 281 aa9.73□□□□□ -0.85
CUL4A-212ENST00000617546 C2orf78A6NCI8 922 aa9.72□□□□□ -0.85
CUL4A-212ENST00000617546 OR6C74A6NCV1 312 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms