RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 IMPA1P29218 277 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 BUD31P41223 144 aaPredicted RBP12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 OR10A3P58181 314 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 WDR5P61964 334 aaKnown RBP12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF763Q0D2J5 394 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 DSG2Q14126 1118 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 PUM1Q14671 1186 aaKnown RBP eCLIP12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 ST3GAL2Q16842 350 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 C3P1Q6ZMU1 363 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 NPAS4Q8IUM7 802 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 DOK4Q8TEW6 326 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 KIAA1143Q96AT1 154 aaPredicted RBP12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 ARSGQ96EG1 525 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF582Q96NG8 517 aaPredicted RBP12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 FCRL4Q96PJ5 515 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 TTTY10Q9BZA0 68 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 SLC6A16Q9GZN6 736 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 OR2AG1Q9H205 316 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 OR10A4Q9H209 315 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 SCPEP1Q9HB40 452 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 GPBP1L1Q9HC44 474 aaPredicted RBP12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 ZMAT5Q9UDW3 170 aaKnown RBP12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 SEC14L3Q9UDX4 400 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 RASD1Q9Y272 281 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 DYRK1BQ9Y463 629 aa12.63□□□□□ -0.39
PCDHA11-202ENST00000616325 A0A0B4J203 849 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 FEZF1A0PJY2 475 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 PDCD5O14737 125 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ERAL1O75616 437 aaKnown RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 CBX7O95931 251 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 EIF4EP06730 217 aaKnown RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 FAM157BP0CG42 384 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ASMTP46597 345 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 SELENOPP49908 381 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 CAMK2DQ13557 499 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF273Q14593 569 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ATRAIDQ6UW56 229 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 RRM2BQ7LG56 351 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ALG14Q96F25 216 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ABHD1Q96SE0 405 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 SECISBP2Q96T21 854 aaKnown RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 REEP4Q9H6H4 257 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 SLCO1C1Q9NYB5 712 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 TRBV5-4A0A0C4DH59 114 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 QSOX1O00391 747 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 NRG2O14511 850 aaPredicted RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 PIP5K1CO60331 668 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 B3GALNT1O75752 331 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 HPXP02790 462 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 HLA-DPB1P04440 258 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 SHC1P29353 583 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 MTNR1AP48039 350 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 GIPRP48546 466 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 MVDP53602 400 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 PUS10Q3MIT2 529 aaKnown RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 SHEQ5VZ18 495 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 SYT9Q86SS6 491 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 SIAH3Q8IW03 269 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 WDR20Q8TBZ3 569 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 SLC7A13Q8TCU3 470 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 GCDHQ92947 438 aaPredicted RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 MARVELD3Q96A59 401 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ZC3HAV1LQ96H79 300 aaKnown RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 USB1Q9BQ65 265 aaKnown RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 UQCC2Q9BRT2 126 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 FNDC11Q9BVV2 318 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 EMC7Q9NPA0 242 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 COPZ2Q9P299 210 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 NFKBIL1Q9UBC1 381 aaPredicted RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 SLC25A13Q9UJS0 675 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 GBF1Q92538 1859 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF821O75541 412 aaPredicted RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 PRKRAO75569 313 aaKnown RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 EIF2B5Q13144 721 aaKnown RBP12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 RIN1Q13671 783 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 DUSP6Q16828 381 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 TCTE1Q5JU00 501 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ARL9Q6T311 187 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ZNF687Q8N1G0 1237 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 BBS10Q8TAM1 723 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 HERVK_113Q902F9 699 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 VN1R3Q9BXE9 311 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 CWH43Q9H720 699 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 NT5DC2Q9H857 520 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 MGAT4BQ9UQ53 548 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 ASF1AQ9Y294 204 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 MYO15AQ9UKN7 3530 aa12.62□□□□□ -0.39
PCDHA11-202ENST00000616325 C1orf226A1L170 272 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 KCNJ13O60928 360 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 SOD1P00441 154 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 CBSLP0DN79 551 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 TFPIP10646 304 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 PIPP12273 146 aaPredicted RBP12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 ACSL1P33121 698 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 CBSP35520 551 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 DGKGP49619 791 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 AP1S2P56377 157 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 ILKQ13418 452 aa12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 SNTB2Q13425 540 aaKnown RBP12.61□□□□□ -0.39
PCDHA11-202ENST00000616325 CDKN3Q16667 212 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms