RNA–Protein interactions for RNA: ENST00000612050.4

CBWD3-208, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,440 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-208ENST00000612050 CHRNB4P30926 498 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 RFX3P48380 749 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 TRPC1P48995 793 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 CDK9P50750 372 aaKnown RBP11.28□□□□□ -0.6
CBWD3-208ENST00000612050 CORO7P57737 925 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 DUSP8Q13202 625 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 TP53BP2Q13625 1128 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 PDE7AQ13946 482 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 RCAN2Q14206 197 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 C6orf136Q5SQH8 315 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 SP5Q6BEB4 398 aaPredicted RBP11.28□□□□□ -0.6
CBWD3-208ENST00000612050 ANKRD26P1Q6NSI1 321 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 AAGABQ6PD74 315 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 ZCCHC12Q6PEW1 402 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 ZNF551Q7Z340 670 aaPredicted RBP11.28□□□□□ -0.6
CBWD3-208ENST00000612050 VPS37AQ8NEZ2 397 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 NUP43Q8NFH3 380 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 OR4K17Q8NGC6 315 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 GPR151Q8TDV0 419 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 SLC9A6Q92581 669 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 JADE3Q92613 823 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 HGDQ93099 445 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 CIDECQ96AQ7 238 aaPredicted RBP11.28□□□□□ -0.6
CBWD3-208ENST00000612050 MOAP1Q96BY2 351 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 EFHD2Q96C19 240 aaPredicted RBP11.28□□□□□ -0.6
CBWD3-208ENST00000612050 GNRHR2Q96P88 292 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 TBL1XR1Q9BZK7 514 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 SLC6A15Q9H2J7 730 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 PTGES2Q9H7Z7 377 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 ANKRA2Q9H9E1 313 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 NEUROD4Q9HD90 331 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 PNPLA3Q9NST1 481 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 PPP4R1LQ9P1A2 415 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 DKKL1Q9UK85 242 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 ABCG2Q9UNQ0 655 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 EXO1Q9UQ84 846 aaKnown RBP11.28□□□□□ -0.6
CBWD3-208ENST00000612050 WIF1Q9Y5W5 379 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 SNX8Q9Y5X2 465 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 LIPGQ9Y5X9 500 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 FLNCQ14315 2725 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 RELNP78509 3460 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 NINQ8N4C6 2090 aa11.28□□□□□ -0.6
CBWD3-208ENST00000612050 TRPC5OSA6NMA1 111 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 AHRRA9YTQ3 701 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 SLCO1B7G3V0H7 640 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 ZNHIT1O43257 154 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 TSPAN2O60636 221 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 ACTL6AO96019 429 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 CELA3AP09093 270 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 ALOX5P09917 674 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 RFPL3SP0C7P2 107 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 BGNP21810 368 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 GABRA3P34903 492 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 ADORA2A-AS1P86434 159 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 PSG6Q00889 435 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 EMX2Q04743 252 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 PMPCAQ10713 525 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 MLC1Q15049 377 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 ZNF630Q2M218 657 aaPredicted RBP11.27□□□□□ -0.6
CBWD3-208ENST00000612050 C1orf185Q5T7R7 199 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 BICRALQ6AI39 1079 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 FGD2Q7Z6J4 655 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 IFNEQ86WN2 208 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 PLCZ1Q86YW0 608 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 LRRC34Q8IZ02 419 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 ZNF781Q8N8C0 355 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 SIMC1Q8NDZ2 872 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 RAB3IL1Q8TBN0 382 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 MGARPQ8TDB4 240 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 PPP1R36Q96LQ0 422 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 NODALQ96S42 347 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 DMRTA2Q96SC8 542 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 LMF2Q9BU23 707 aaKnown RBP11.27□□□□□ -0.6
CBWD3-208ENST00000612050 PROK2Q9HC23 129 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 ZCCHC3Q9NUD5 404 aaKnown RBP11.27□□□□□ -0.6
CBWD3-208ENST00000612050 STOML1Q9UBI4 398 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 ATP6V1HQ9UI12 483 aa11.27□□□□□ -0.6
CBWD3-208ENST00000612050 FAF1Q9UNN5 650 aaPredicted RBP11.27□□□□□ -0.6
CBWD3-208ENST00000612050 LRRK2Q5S007 2527 aa11.27□□□□□ -0.61
CBWD3-208ENST00000612050 ICE1Q9Y2F5 2266 aa11.27□□□□□ -0.61
CBWD3-208ENST00000612050 C2orf72A6NCS6 295 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 DHRS4L1P0CG22 281 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 ATP6V1C1P21283 382 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 PTPN6P29350 595 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 EVI2BP34910 448 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 DCTP40126 519 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 SLC18A1P54219 525 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 MAGOHP61326 146 aaKnown RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 TNFAIP8L3Q5GJ75 292 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 BEND6Q5SZJ8 279 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 CHMP1BQ7LBR1 199 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 CHERPQ8IWX8 916 aaKnown RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 COX18Q8N8Q8 333 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 OR56A1Q8NGH5 318 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 OR6Y1Q8NGX8 325 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 OR5P2Q8WZ92 322 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 G6PC3Q9BUM1 346 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 DPY30Q9C005 99 aa11.26□□□□□ -0.61
CBWD3-208ENST00000612050 BHLHE41Q9C0J9 482 aaPredicted RBP11.26□□□□□ -0.61
CBWD3-208ENST00000612050 SLC24A3Q9HC58 644 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms