RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 MN1Q10571 1320 aaPredicted RBP9.78□□□□□ -0.84
PABPC1-224ENST00000610907 CHD9Q3L8U1 2897 aa9.78□□□□□ -0.84
PABPC1-224ENST00000610907 LAMA2P24043 3122 aaKnown RBP9.77□□□□□ -0.84
PABPC1-224ENST00000610907 A0A087WV62 115 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 HYKKA2RU49 373 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 FAM170BA6NMN3 283 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 OR5K4A6NMS3 321 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 KDM4EB2RXH2 506 aaPredicted RBP9.77□□□□□ -0.85
PABPC1-224ENST00000610907 ZNF670-ZNF695F2Z2N8 137 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 STK25O00506 426 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 TPST2O60704 377 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 UBXN7O94888 489 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 PTTG1O95997 202 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 UGT2B7P16662 529 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 CPEP16870 476 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 MYL12AP19105 171 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 OMPP47874 163 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 DGKEP52429 567 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 RGS8P57771 180 aaPredicted RBP9.77□□□□□ -0.85
PABPC1-224ENST00000610907 SRP54P61011 504 aaKnown RBP9.77□□□□□ -0.85
PABPC1-224ENST00000610907 BNC1Q01954 994 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 DUSP8Q13202 625 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 MINDY4Q4G0A6 757 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 PRRT3Q5FWE3 981 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 EOGTQ5NDL2 527 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 PRICKLE2Q7Z3G6 844 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 CCDC190Q86UF4 302 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 VRK2Q86Y07 508 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 PARP16Q8N5Y8 322 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 OR7G2Q8NG99 324 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 KAT2AQ92830 837 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 RFKQ969G6 155 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 GPA33Q99795 319 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 CCDC32Q9BV29 185 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 ASPNQ9BXN1 380 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 PIGUQ9H490 435 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 EQTNQ9NQ60 294 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 POT1Q9NUX5 634 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 IL20Q9NYY1 176 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 ACTR10Q9NZ32 417 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 CLEC2DQ9UHP7 191 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 C19orf53Q9UNZ5 99 aaPredicted RBP9.77□□□□□ -0.85
PABPC1-224ENST00000610907 SATB2Q9UPW6 733 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 TRAPPC4Q9Y296 219 aa9.77□□□□□ -0.85
PABPC1-224ENST00000610907 EXOSC1Q9Y3B2 195 aaKnown RBP9.77□□□□□ -0.85
PABPC1-224ENST00000610907 TICRRQ7Z2Z1 1910 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 C2orf74A8MZ97 194 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 RASGRP1O95267 797 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 AK1P00568 194 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 HMGN1P05114 100 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 HBQ1P09105 142 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 CKMT1AP12532 417 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 CPMP14384 443 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 ALOX12P18054 663 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 MAGP20916 626 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 CRYBB2P43320 205 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 RORCP51449 518 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 PDX1P52945 283 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 WNT4P56705 351 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 DEFA1P59665 94 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 DEFA3P59666 94 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 RPS3AP61247 264 aaKnown RBP9.76□□□□□ -0.85
PABPC1-224ENST00000610907 ILF3Q12906 894 aaKnown RBP eCLIP9.76□□□□□ -0.85
PABPC1-224ENST00000610907 RUNX2Q13950 521 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 LTB4RQ15722 352 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 PUS10Q3MIT2 529 aaKnown RBP9.76□□□□□ -0.85
PABPC1-224ENST00000610907 EXOSC6Q5RKV6 272 aaKnown RBP9.76□□□□□ -0.85
PABPC1-224ENST00000610907 C6orf132Q5T0Z8 1188 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 FCRL6Q6DN72 434 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 FRRS1Q6ZNA5 592 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 PLEKHM3Q6ZWE6 761 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 MBOAT2Q6ZWT7 520 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 OLIG3Q7RTU3 272 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 RD3Q7Z3Z2 195 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 SLC22A16Q86VW1 577 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 KIF18BQ86Y91 864 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 TRIM48Q8IWZ4 208 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 PHC2Q8IXK0 858 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 IQCF1Q8N6M8 205 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 SLC16A11Q8NCK7 471 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 JPH3Q8WXH2 748 aaPredicted RBP9.76□□□□□ -0.85
PABPC1-224ENST00000610907 TSACCQ96A04 125 aaPredicted RBP9.76□□□□□ -0.85
PABPC1-224ENST00000610907 RERGQ96A58 199 aaPredicted RBP9.76□□□□□ -0.85
PABPC1-224ENST00000610907 MCHR1Q99705 422 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 ZFYVE21Q9BQ24 234 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 TMEM168Q9H0V1 697 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 RNF167Q9H6Y7 350 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 DUSP22Q9NRW4 184 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 SEMA4GQ9NTN9 838 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 ZNF443Q9Y2A4 671 aaPredicted RBP9.76□□□□□ -0.85
PABPC1-224ENST00000610907 WDR45Q9Y484 360 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 CHST2Q9Y4C5 530 aa9.76□□□□□ -0.85
PABPC1-224ENST00000610907 SNRNP200O75643 2136 aaKnown RBP9.76□□□□□ -0.85
PABPC1-224ENST00000610907 KIR2DS5A0A0G2JLQ3 304 aa9.75□□□□□ -0.85
PABPC1-224ENST00000610907 A0A0G2JNG1 304 aa9.75□□□□□ -0.85
PABPC1-224ENST00000610907 A0A1W2PS29 197 aa9.75□□□□□ -0.85
PABPC1-224ENST00000610907 CPSF4LA6NMK7 179 aaKnown RBP9.75□□□□□ -0.85
PABPC1-224ENST00000610907 C10orf142B7Z368 130 aa9.75□□□□□ -0.85
PABPC1-224ENST00000610907 KIR2DS3K7RE56 304 aa9.75□□□□□ -0.85
PABPC1-224ENST00000610907 KLF4O43474 513 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms