RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 ACSM1Q08AH1 577 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 FOXD4Q12950 439 aaPredicted RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 CHIT1Q13231 466 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 ZXDCQ2QGD7 858 aaPredicted RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 SLC36A2Q495M3 483 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 MPPE1Q53F39 396 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 SPOUT1Q5T280 376 aaKnown RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 PGBD2Q6P3X8 592 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 HSD17B13Q7Z5P4 300 aaPredicted RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 CMIPQ8IY22 773 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 SLC39A11Q8N1S5 342 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 BVESQ8NE79 360 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 FGF11Q92914 225 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 WNT2BQ93097 391 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 TMEM169Q96HH4 297 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 HIST1H2AJQ99878 128 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 IER2Q9BTL4 223 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 KLF16Q9BXK1 252 aaPredicted RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 SLC12A9Q9BXP2 914 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 CACNG6Q9BXT2 260 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 MS4A7Q9GZW8 240 aaPredicted RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 RNF208Q9H0X6 261 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 ASB8Q9H765 288 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 DNAJC11Q9NVH1 559 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 CLCA2Q9UQC9 943 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 DNAH12Q6ZR08 3092 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 SCN8AQ9UQD0 1980 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 ANAPC1Q9H1A4 1944 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 MGAT4DA6NG13 374 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 CCDC85CA6NKD9 419 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 AIPO00170 330 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 NUPL2O15504 423 aaKnown RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 EEF1E1O43324 174 aaKnown RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 PRAMEF4O60810 478 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 HRGP04196 525 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 SRPRAP08240 638 aaKnown RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 NMBP08949 121 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 ANXA4P09525 319 aaPredicted RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 ITGALP20701 1170 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 ACRV1P26436 265 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 CALCRP30988 508 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 MTNR1BP49286 362 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 SMIM11AP58511 58 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 TSPAN5P62079 268 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 HBA1P69905 142 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 NFATC2Q13469 925 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 RAB33AQ14088 237 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 PUM1Q14671 1186 aaKnown RBP eCLIP11.24□□□□□ -0.61
TP53-220ENST00000610623 ETFDHQ16134 617 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 NDUFA9Q16795 377 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 ADGRF1Q5T601 910 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 PRAMEF9Q5VWM5 478 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 HBMQ6B0K9 141 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 FAM151BQ6UXP7 276 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 CD300LDQ6UXZ3 194 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 ZNF852Q6ZMS4 543 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 BTN2A1Q7KYR7 527 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 TOMM5Q8N4H5 51 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 OR56B4Q8NH76 319 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 RPLP0P6Q8NHW5 317 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 WDR20Q8TBZ3 569 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 APOBEC4Q8WW27 367 aaKnown RBP11.24□□□□□ -0.61
TP53-220ENST00000610623 RNFT2Q96EX2 444 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 C19orf43Q9BQ61 176 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 SPON2Q9BUD6 331 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 C11orf49Q9H6J7 331 aa11.24□□□□□ -0.61
TP53-220ENST00000610623 TRBV5-4A0A0C4DH59 114 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 ABHD14A-ACY1A0A1B0GW23 586 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 OR6C65A6NJZ3 312 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 CACNB4O00305 520 aaPredicted RBP11.23□□□□□ -0.61
TP53-220ENST00000610623 EFCAB14O75071 495 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 NFATC1O95644 943 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 H1F0P07305 194 aaKnown RBP11.23□□□□□ -0.61
TP53-220ENST00000610623 C8GP07360 202 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 LIMS3P0CW19 117 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 LIMS4P0CW20 117 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 LAG3P18627 525 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 NPR2P20594 1047 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 GIFP27352 417 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 GIPRP48546 466 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 CASP9P55211 416 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 GPR85P60893 370 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 PLD1Q13393 1074 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 PTPRRQ15256 657 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 IDNKQ5T6J7 187 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 LYPD4Q6UWN0 246 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 SEZ6L2Q6UXD5 910 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 UBE2R2Q712K3 238 aaPredicted RBP11.23□□□□□ -0.61
TP53-220ENST00000610623 NLRC3Q7RTR2 1065 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 RNF175Q8N4F7 328 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 MOSPD2Q8NHP6 518 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 POF1BQ8WVV4 589 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 EID2BQ96D98 161 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 TMED9Q9BVK6 235 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 SAV1Q9H4B6 383 aaPredicted RBP11.23□□□□□ -0.61
TP53-220ENST00000610623 C12orf49Q9H741 205 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 METTL17Q9H7H0 456 aaPredicted RBP11.23□□□□□ -0.61
TP53-220ENST00000610623 TBC1D17Q9HA65 648 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 BRF2Q9HAW0 419 aa11.23□□□□□ -0.61
TP53-220ENST00000610623 CPNE7Q9UBL6 633 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms