RNA–Protein interactions for RNA: ENST00000600628.2

SSBP4-208, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-208ENST00000600628 PTPN6P29350 595 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 RPL3P39023 403 aaKnown RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 ZFP36L2P47974 494 aaKnown RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 MAN2A2P49641 1150 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 CDK9P50750 372 aaKnown RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 DIO3P55073 304 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 MAD2L1Q13257 205 aaPredicted RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 GAB1Q13480 694 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 SLC10A1Q14973 349 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 PRAMEF20Q5VT98 475 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 SLC30A6Q6NXT4 461 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 MTFR2Q6P444 385 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 ZCCHC12Q6PEW1 402 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 PRR22Q8IZ63 422 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 MARVELD2Q8N4S9 558 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 NATD1Q8N6N6 113 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 WDSUB1Q8N9V3 476 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 FNDC5Q8NAU1 212 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 NEIL3Q8TAT5 605 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 DIO2Q92813 273 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 TMBIM1Q969X1 311 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 TESCQ96BS2 214 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 ZBTB9Q96C00 473 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 PPCDCQ96CD2 204 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 FAM120BQ96EK7 910 aaKnown RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 MAGED4Q96JG8 741 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 ATP6V1G3Q96LB4 118 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 COL21A1Q96P44 957 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 C1orf50Q9BV19 199 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 BHLHE41Q9C0J9 482 aaPredicted RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 MANSC1Q9H8J5 431 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 PFDN4Q9NQP4 134 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 GPATCH2Q9NW75 528 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 SPRR3Q9UBC9 169 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 SUCOQ9UBS9 1254 aaKnown RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 SH3BGRL2Q9UJC5 107 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 BOKQ9UMX3 212 aaPredicted RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 MAPRE3Q9UPY8 281 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 C15orf41Q9Y2V0 281 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 MEMO1Q9Y316 297 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 HEATR5AQ86XA9 2040 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 HRNRQ86YZ3 2850 aaPredicted RBP8.03□□□□□ -1.12
SSBP4-208ENST00000600628 CACNA1DQ01668 2161 aa8.03□□□□□ -1.12
SSBP4-208ENST00000600628 MED12LQ86YW9 2145 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 FAM166BA8MTA8 275 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ACOT7O00154 380 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 IGKV1D-16P01601 117 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ESRRAP11474 423 aaPredicted RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ABOP16442 354 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ELAVL4P26378 380 aaKnown RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 PTGS2P35354 604 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 MRPL19P49406 292 aaKnown RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 MANFP55145 182 aaKnown RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 KCNJ2P63252 427 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 PLCXD2Q0VAA5 305 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ART3Q13508 389 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 EFR3AQ14156 821 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 CDSNQ15517 529 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 PDCD2Q16342 344 aaPredicted RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 NNATQ16517 81 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 HHATQ5VTY9 493 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 RTL6Q6ICC9 239 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 MFSD12Q6NUT3 480 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 APOOLQ6UXV4 268 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 RPTNQ6XPR3 784 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 MRGPRGQ86SM5 289 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ADGRE4PQ86SQ3 457 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 WDR75Q8IWA0 830 aaKnown RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 SLC44A2Q8IWA5 706 aaPredicted RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ANKRD42Q8N9B4 389 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 FADS6Q8N9I5 356 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 CDRT4Q8N9R6 151 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 SLC16A11Q8NCK7 471 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 GOT1L1Q8NHS2 421 aaPredicted RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 CDC26Q8NHZ8 85 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 SFXN5Q8TD22 340 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ACTRT2Q8TDY3 377 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 OR5P2Q8WZ92 322 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ZNF75CPQ92670 426 aaPredicted RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 TUBGCP3Q96CW5 907 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 TEX37Q96LM6 180 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ZNF597Q96LX8 424 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 GNRHR2Q96P88 292 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 TREX2Q9BQ50 279 aaPredicted RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 DOHHQ9BU89 302 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 NUF2Q9BZD4 464 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 RTN4RQ9BZR6 473 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 DEFB127Q9H1M4 99 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 CXorf36Q9H7Y0 433 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 GALNT9Q9HCQ5 603 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 DUSP22Q9NRW4 184 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 DDX18Q9NVP1 670 aaKnown RBP8.02□□□□□ -1.13
SSBP4-208ENST00000600628 CBLCQ9ULV8 474 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ABCG2Q9UNQ0 655 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 FAM215AQ9Y5M1 114 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 GPR45Q9Y5Y3 372 aa8.02□□□□□ -1.13
SSBP4-208ENST00000600628 ANKHD1Q8IWZ3 2542 aaKnown RBP8.01□□□□□ -1.13
SSBP4-208ENST00000600628 PRAMEF25A6NGN4 478 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 NPIPB9F8W1W9 429 aa8.01□□□□□ -1.13
SSBP4-208ENST00000600628 SLCO1B7G3V0H7 640 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms