RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 ARHGAP11AQ6P4F7 1023 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 ZCCHC12Q6PEW1 402 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 GOLGA6L1Q8N7Z2 621 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 OR5M3Q8NGP4 307 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 CEP70Q8NHQ1 597 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 OR5P2Q8WZ92 322 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 ZNF75CPQ92670 426 aaPredicted RBP14.82□□□□□ -0.04
LSM4-206ENST00000600289 TMBIM1Q969X1 311 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 MAELQ96JY0 434 aaKnown RBP14.82□□□□□ -0.04
LSM4-206ENST00000600289 RILPQ96NA2 401 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 MS4A4EQ96PG1 132 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 C3orf14Q9HBI5 128 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 SIRT3Q9NTG7 399 aaPredicted RBP14.82□□□□□ -0.04
LSM4-206ENST00000600289 B4GALT7Q9UBV7 327 aa14.82□□□□□ -0.04
LSM4-206ENST00000600289 ZNF407Q9C0G0 2248 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 A0A1W2PRB8 838 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 OR14I1A6ND48 311 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 FAM166BA8MTA8 275 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 ANKRD28O15084 1053 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 EMC8O43402 210 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 PTGDSP41222 190 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 MAGEA5P43359 124 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 DIO3P55073 304 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 CASP6P55212 293 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 MRPS22P82650 360 aaKnown RBP14.81□□□□□ -0.04
LSM4-206ENST00000600289 ZNHIT3Q15649 155 aaPredicted RBP14.81□□□□□ -0.04
LSM4-206ENST00000600289 FNDC7Q5VTL7 733 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 TMEM198Q66K66 360 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 MTFR2Q6P444 385 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 SLC44A2Q8IWA5 706 aaPredicted RBP14.81□□□□□ -0.04
LSM4-206ENST00000600289 KRTCAP2Q8N6L1 136 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 CDRT4Q8N9R6 151 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 OR8J2Q8NGG1 315 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 PIWIL2Q8TC59 973 aaKnown RBP14.81□□□□□ -0.04
LSM4-206ENST00000600289 TMCO6Q96DC7 493 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 GIMAP5Q96F15 307 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 PPP1R36Q96LQ0 422 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 C7orf26Q96N11 449 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 NODALQ96S42 347 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 UBQLN3Q9H347 655 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 NEUROD4Q9HD90 331 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 Q9N2J8 555 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 ACKR4Q9NPB9 350 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 PHF3Q92576 2039 aaKnown RBP14.81□□□□□ -0.04
LSM4-206ENST00000600289 FREM3P0C091 2139 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 CCDC168Q8NDH2 2452 aa14.81□□□□□ -0.04
LSM4-206ENST00000600289 TRGV8A0A0C4DH27 118 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 PRAMEF25A6NGN4 478 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 SUSD5O60279 629 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 HCN1O60741 890 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 NME6O75414 186 aaPredicted RBP14.8□□□□□ -0.04
LSM4-206ENST00000600289 SASH3O75995 380 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 NKX2-2O95096 273 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 ABOP16442 354 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 IL12BP29460 328 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 PTGS2P35354 604 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 KRT20P35900 424 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 PPP2R2AP63151 447 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 PRR5P85299 388 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 HSF1Q00613 529 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 C3AR1Q16581 482 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 DPY19L1Q2PZI1 675 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 LSM12Q3MHD2 195 aaKnown RBP14.8□□□□□ -0.04
LSM4-206ENST00000600289 VPS26BQ4G0F5 336 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 BICRALQ6AI39 1079 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 TRILQ7L0X0 811 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 SPATA19Q7Z5L4 167 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 PACS2Q86VP3 889 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 WDR75Q8IWA0 830 aaKnown RBP14.8□□□□□ -0.04
LSM4-206ENST00000600289 NUP43Q8NFH3 380 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 FAM57AQ8TBR7 257 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 TESCQ96BS2 214 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 MOAP1Q96BY2 351 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 DUSP26Q9BV47 211 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 OSBPL11Q9BXB4 747 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 METTL7AQ9H8H3 244 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 AIG1Q9NVV5 245 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 GIN1Q9NXP7 522 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 CBLCQ9ULV8 474 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 C15orf41Q9Y2V0 281 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 OR10H1Q9Y4A9 318 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 ARHGAP21Q5T5U3 1957 aa14.8□□□□□ -0.04
LSM4-206ENST00000600289 DIDO1Q9BTC0 2240 aaKnown RBP14.8□□□□□ -0.04
LSM4-206ENST00000600289 A0A1B0GTH9 108 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 AQP7O14520 342 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 ZNF195O14628 629 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 PRRG2O14669 202 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 SNPHO15079 494 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 HNRNPRO43390 633 aaKnown RBP14.79□□□□□ -0.04
LSM4-206ENST00000600289 CDC40O60508 579 aaKnown RBP eCLIP14.79□□□□□ -0.04
LSM4-206ENST00000600289 DNAJC13O75165 2243 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 REM1O75628 298 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 IL33O95760 270 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 HPNP05981 417 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 ALDOCP09972 364 aaKnown RBP14.79□□□□□ -0.04
LSM4-206ENST00000600289 RFPL3SP0C7P2 107 aa14.79□□□□□ -0.04
LSM4-206ENST00000600289 CLNS1AP54105 237 aaKnown RBP14.79□□□□□ -0.04
LSM4-206ENST00000600289 PSMD4P55036 377 aaKnown RBP14.79□□□□□ -0.04
LSM4-206ENST00000600289 GAB1Q13480 694 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms