RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 PCDHGB6Q9Y5F9 930 aa9.72□□□□□ -0.85
LIG1-210ENST00000596332 RNF103-CHMP3A0A140T963 221 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 DYTNA2CJ06 578 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 NPIPB9F8W1W9 429 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 NME2P1O60361 137 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 FADS1O60427 444 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 CCDC22O60826 627 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 KCNK2O95069 426 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 IL33O95760 270 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 SP1P08047 785 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 NUDT7P0C024 238 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 T-ENOLP0DO92 83 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 COX4I1P13073 169 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 MATN1P21941 496 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 NME2P22392 152 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 CYB561P49447 251 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 MRPS22P82650 360 aaKnown RBP9.71□□□□□ -0.86
LIG1-210ENST00000596332 PRR5P85299 388 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 TP53BP2Q13625 1128 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 INPP5JQ15735 1006 aaPredicted RBP9.71□□□□□ -0.86
LIG1-210ENST00000596332 ADRM1Q16186 407 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 CCNJQ5T5M9 372 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 ZNF324BQ6AW86 544 aaPredicted RBP9.71□□□□□ -0.86
LIG1-210ENST00000596332 SLC25A25Q6KCM7 469 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 TMEM81Q6P7N7 255 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 OPN5Q6U736 354 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 DNAJC14Q6Y2X3 702 aaPredicted RBP9.71□□□□□ -0.86
LIG1-210ENST00000596332 SNX32Q86XE0 403 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 RNF130Q86XS8 419 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 HPS6Q86YV9 775 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 SLC34A3Q8N130 599 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 ZADH2Q8N4Q0 377 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 POU5F2Q8N7G0 328 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 CHDHQ8NE62 594 aaPredicted RBP9.71□□□□□ -0.86
LIG1-210ENST00000596332 SPPL2AQ8TCT8 520 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 SLC9A6Q92581 669 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 DIO2Q92813 273 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 CDS1Q92903 461 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 RAB8BQ92930 207 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 ZG16BQ96DA0 208 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 FRMD6Q96NE9 622 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 STACQ99469 402 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 SDF2Q99470 211 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 UTP23Q9BRU9 249 aaKnown RBP9.71□□□□□ -0.86
LIG1-210ENST00000596332 OR51I1Q9H343 314 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 TPT1P8Q9HAU6 139 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 DUSP22Q9NRW4 184 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 TEKT2Q9UIF3 430 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 CBLCQ9ULV8 474 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 B3GNT3Q9Y2A9 372 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 NDUFAF1Q9Y375 327 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 PCDHGA10Q9Y5H3 936 aa9.71□□□□□ -0.86
LIG1-210ENST00000596332 CNTRLQ7Z7A1 2325 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 CENPVL1A0A0U1RR11 272 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 ANKRD33BA6NCL7 494 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 OR6C70A6NIJ9 312 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 TTC36A6NLP5 189 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 A8MVJ9 347 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 FCMRO60667 390 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 DPM1O60762 260 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 TNFRSF21O75509 655 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 TFPTP0C1Z6 253 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 OR12D1P0DN82 309 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 SFTPCP11686 197 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 BMP2P12643 396 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 CYP4B1P13584 511 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 GPX2P18283 190 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 CASP3P42574 277 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 PNLIPRP2P54317 469 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 ARG2P78540 354 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 PLAURQ03405 335 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 ZNF155Q12901 538 aaPredicted RBP9.7□□□□□ -0.86
LIG1-210ENST00000596332 ZNF169Q14929 603 aaPredicted RBP9.7□□□□□ -0.86
LIG1-210ENST00000596332 RGNQ15493 299 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 PRR30Q53SZ7 412 aaPredicted RBP9.7□□□□□ -0.86
LIG1-210ENST00000596332 ZNF766Q5HY98 468 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 COQ5Q5HYK3 327 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.7□□□□□ -0.86
LIG1-210ENST00000596332 C6orf163Q5TEZ5 329 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 IRAK1BP1Q5VVH5 260 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 RPUSD3Q6P087 351 aaKnown RBP9.7□□□□□ -0.86
LIG1-210ENST00000596332 NUP54Q7Z3B4 507 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 GALNT10Q86SR1 603 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 SULF2Q8IWU5 870 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 GPALPP1Q8IXQ4 340 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 CYP4Z2PQ8N1L4 340 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 ZNF843Q8N446 348 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 TMEM156Q8N614 296 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 GOLM1Q8NBJ4 401 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 PSD4Q8NDX1 1056 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 OR52N2Q8NGI0 321 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 OR4C3Q8NH37 302 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 FBXO27Q8NI29 283 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 RP9Q8TA86 221 aaKnown RBP9.7□□□□□ -0.86
LIG1-210ENST00000596332 SLC22A8Q8TCC7 542 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 PNPT1Q8TCS8 783 aaKnown RBP9.7□□□□□ -0.86
LIG1-210ENST00000596332 GPR151Q8TDV0 419 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 GRHL3Q8TE85 626 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 ASB15Q8WXK1 588 aa9.7□□□□□ -0.86
LIG1-210ENST00000596332 PNPLA2Q96AD5 504 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms