RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 METTL7AQ9H8H3 244 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 ROPN1Q9HAT0 212 aaPredicted RBP9.47□□□□□ -0.89
VPS4B-207ENST00000591519 SLC17A7Q9P2U7 560 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 VPS29Q9UBQ0 182 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 TRPS1Q9UHF7 1281 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 LGALS13Q9UHV8 139 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 CAMK2AQ9UQM7 478 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 GPR55Q9Y2T6 319 aaPredicted RBP9.47□□□□□ -0.89
VPS4B-207ENST00000591519 NF1P21359 2839 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 DOCK7Q96N67 2140 aa9.47□□□□□ -0.89
VPS4B-207ENST00000591519 KIAA1549Q9HCM3 1950 aa9.46□□□□□ -0.89
VPS4B-207ENST00000591519 FRG2CA6NGY1 282 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 TUBAL3A6NHL2 446 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 OR6C70A6NIJ9 312 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 GNB5O14775 395 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 RGS16O15492 202 aaPredicted RBP9.46□□□□□ -0.9
VPS4B-207ENST00000591519 UGT2B11O75310 529 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 ERAL1O75616 437 aaKnown RBP9.46□□□□□ -0.9
VPS4B-207ENST00000591519 RCBTB2O95199 551 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 DRD2P14416 443 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 CPA3P15088 417 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 IMPDH1P20839 514 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 CRHR1P34998 444 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 GFRA1P56159 465 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 EEF1A1P68104 462 aaKnown RBP9.46□□□□□ -0.9
VPS4B-207ENST00000591519 PSPHP78330 225 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 HMGCS1Q01581 520 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 DUSP2Q05923 314 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 SLC18A2Q05940 514 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 RCAN2Q14206 197 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 EXOSC7Q15024 291 aaKnown RBP9.46□□□□□ -0.9
VPS4B-207ENST00000591519 RASA2Q15283 850 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 TOMM20Q15388 145 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 CCDC153Q494R4 210 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 TCHHL1Q5QJ38 904 aaPredicted RBP9.46□□□□□ -0.9
VPS4B-207ENST00000591519 DCST1Q5T197 706 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 EEF1A1P5Q5VTE0 462 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 MMP21Q8N119 569 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 CDYL2Q8N8U2 506 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 ADCY4Q8NFM4 1077 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 OR52R1Q8NGF1 315 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 GOT1L1Q8NHS2 421 aaPredicted RBP9.46□□□□□ -0.9
VPS4B-207ENST00000591519 RNF138Q8WVD3 245 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 C11orf24Q96F05 449 aaPredicted RBP9.46□□□□□ -0.9
VPS4B-207ENST00000591519 RMND5BQ96G75 393 aaPredicted RBP9.46□□□□□ -0.9
VPS4B-207ENST00000591519 SLC35A4Q96G79 324 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 APOPT1Q96IL0 206 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 FAM111AQ96PZ2 611 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 ALPK1Q96QP1 1244 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 TRIB1Q96RU8 372 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 HBEGFQ99075 208 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 ITPAQ9BY32 194 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 OR2B2Q9GZK3 357 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 BCAP29Q9UHQ4 241 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 MCM8Q9UJA3 840 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 PLLPQ9Y342 182 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 ZNF780BQ9Y6R6 833 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 MED12Q93074 2177 aa9.46□□□□□ -0.9
VPS4B-207ENST00000591519 MAP1AP78559 2803 aaPredicted RBP9.46□□□□□ -0.9
VPS4B-207ENST00000591519 MANBAO00462 879 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 TSPAN2O60636 221 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 ERLIN1O75477 346 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 KRT6AP02538 564 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 KRT6BP04259 564 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 TUBBP07437 444 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 CT45A8P0DMV1 189 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 CT45A9P0DMV2 189 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 CYP4B1P13584 511 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 FOSL1P15407 271 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 KLK2P20151 261 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 CHMP24386 653 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 DNASE1P24855 282 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 HMOX2P30519 316 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 KRT6CP48668 564 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 PCYT1AP49585 367 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 CEBPEQ15744 281 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 CT45A2Q5DJT8 189 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 ZNF628Q5EBL2 1059 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 CFAP157Q5JU67 520 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 XP32Q5T750 250 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 GALNT18Q6P9A2 607 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 SCIMPQ6UWF3 145 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 ENPP6Q6UWR7 440 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 GPRIN3Q6ZVF9 776 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 YRDCQ86U90 279 aaKnown RBP9.45□□□□□ -0.9
VPS4B-207ENST00000591519 C10orf107Q8IVU9 208 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 TRIM42Q8IWZ5 723 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 SAMD14Q8IZD0 417 aaPredicted RBP9.45□□□□□ -0.9
VPS4B-207ENST00000591519 C1orf52Q8N6N3 182 aaKnown RBP9.45□□□□□ -0.9
VPS4B-207ENST00000591519 GBP7Q8N8V2 638 aaPredicted RBP9.45□□□□□ -0.9
VPS4B-207ENST00000591519 BANPQ8N9N5 519 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 C9orf106Q8NAJ2 232 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 TCP10LQ8TDR4 215 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 KLHL29Q96CT2 875 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 TMCO6Q96DC7 493 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 COL21A1Q96P44 957 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 BTBD9Q96Q07 612 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 KCNA7Q96RP8 456 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 TM9SF2Q99805 663 aa9.45□□□□□ -0.9
VPS4B-207ENST00000591519 TUBA1CQ9BQE3 449 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms