RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NMNAT1Q9HAN9 279 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-204ENST00000587339 FOLH1BQ9HBA9 442 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 KRT84Q9NSB2 600 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 RARRES3Q9UL19 164 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 ERVK-19Q9WJR5 959 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 IFT52Q9Y366 437 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 HEMK1Q9Y5R4 338 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-204ENST00000587339 SYT5O00445 386 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 SEC24DO94855 1032 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-204ENST00000587339 ZNF883P0CG24 379 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 CDH2P19022 906 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-204ENST00000587339 LIMS1P48059 325 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 GTF2A1P52655 376 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-204ENST00000587339 POU6F2P78424 691 aaPredicted RBP18.47■□□□□ 0.55
TRIM47-204ENST00000587339 PSG6Q00889 435 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 FUT7Q11130 342 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 GPR68Q15743 365 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 VWA2Q5GFL6 755 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 OR6T1Q8NGN1 323 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 LMF2Q9BU23 707 aaKnown RBP18.47■□□□□ 0.55
TRIM47-204ENST00000587339 ZNF696Q9H7X3 374 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 ZNF232Q9UNY5 417 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 R4GN57 208 aa18.47■□□□□ 0.55
TRIM47-204ENST00000587339 TTC28Q96AY4 2481 aa18.46■□□□□ 0.55
TRIM47-204ENST00000587339 LOC100130705A0A1B0GUX0 176 aa18.46■□□□□ 0.55
TRIM47-204ENST00000587339 D6RAR5 112 aa18.46■□□□□ 0.55
TRIM47-204ENST00000587339 IL7RP16871 459 aa18.46■□□□□ 0.55
TRIM47-204ENST00000587339 VSTM2LQ96N03 204 aa18.46■□□□□ 0.55
TRIM47-204ENST00000587339 ALPK1Q96QP1 1244 aa18.46■□□□□ 0.55
TRIM47-204ENST00000587339 FEVQ99581 238 aa18.46■□□□□ 0.55
TRIM47-204ENST00000587339 MKKSQ9NPJ1 570 aaPredicted RBP18.46■□□□□ 0.55
TRIM47-204ENST00000587339 KLHL28Q9NXS3 571 aa18.46■□□□□ 0.55
TRIM47-204ENST00000587339 LNP1A1A4G5 178 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 C17orf105B2RV13 164 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 PCDH17O14917 1159 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 SCRG1O75711 98 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 ANXA8P13928 327 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 FUT4P22083 530 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 POLR2IP36954 125 aaKnown RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 FOXD4Q12950 439 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 LARS2Q15031 903 aaKnown RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 TTC33Q6PID6 262 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 FIGNL1Q6PIW4 674 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 DHRS4L2Q6PKH6 230 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 SLITRK4Q8IW52 837 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 ZNF619Q8N2I2 560 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 SLC5A8Q8N695 610 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 C7orf57Q8NEG2 295 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 RNF31Q96EP0 1072 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 RMND5BQ96G75 393 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 OR10A5Q9H207 317 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 PNO1Q9NRX1 252 aaKnown RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 ACAD8Q9UKU7 415 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 MYRFQ9Y2G1 1151 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 IGKV3D-11A0A0A0MRZ8 115 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 GXYLT2A0PJZ3 443 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 AGAP5A6NIR3 686 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 NTN3O00634 580 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 DYRK3O43781 588 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 H1F0P07305 194 aaKnown RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 PIN1Q13526 163 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 FGD3Q5JSP0 725 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 C8orf59Q8N0T1 100 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 ZNF786Q8N393 782 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 ATOH1Q92858 354 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 TSLPQ969D9 159 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 SAP130Q9H0E3 1048 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 RIBC2Q9H4K1 309 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 FBXO34Q9NWN3 711 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 SIDT1Q9NXL6 827 aaKnown RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 ZNF443Q9Y2A4 671 aaPredicted RBP18.45■□□□□ 0.54
TRIM47-204ENST00000587339 CHST2Q9Y4C5 530 aa18.45■□□□□ 0.54
TRIM47-204ENST00000587339 SLC16A6O15403 523 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 UGT2B17O75795 530 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 CCNB2O95067 398 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 TIAF1O95411 115 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 LDOC1O95751 146 aaPredicted RBP18.44■□□□□ 0.54
TRIM47-204ENST00000587339 ITGAMP11215 1152 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 TPD52P55327 224 aaPredicted RBP18.44■□□□□ 0.54
TRIM47-204ENST00000587339 SMIM11AP58511 58 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 RHAGQ02094 409 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 PLA2G2CQ5R387 149 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 PWWP2BQ6NUJ5 590 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 DBX2Q6ZNG2 339 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 PRSS58Q8IYP2 241 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 C16orf52Q8NHV5 167 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 PTPMT1Q8WUK0 201 aaPredicted RBP18.44■□□□□ 0.54
TRIM47-204ENST00000587339 CLIP3Q96DZ5 547 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 DHRS1Q96LJ7 313 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 POLE3Q9NRF9 147 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 RLIMQ9NVW2 624 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 FTSJ1Q9UET6 329 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 TMCC3Q9ULS5 477 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 A4GNTQ9UNA3 340 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 DTX4Q9Y2E6 619 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 HCN4Q9Y3Q4 1203 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 PCDHGB2Q9Y5G2 931 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 CLCA3PQ9Y6N3 262 aa18.44■□□□□ 0.54
TRIM47-204ENST00000587339 KIAA0513O60268 411 aa18.43■□□□□ 0.54
TRIM47-204ENST00000587339 BRINP1O60477 761 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms