RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 FOLH1BQ9HBA9 442 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 NEUROD4Q9HD90 331 aa17.53■□□□□ 0.4
TRAF4-216ENST00000586813 BEX4Q9NWD9 120 aaPredicted RBP17.53■□□□□ 0.4
TRAF4-216ENST00000586813 A0A1W2PNV4 684 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 GNG14A0A1W2PPG7 69 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 TGM6O95932 706 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 DPP4P27487 766 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 PNLIPRP2P54317 469 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 GAS1P54826 345 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 HEPACAMQ14CZ8 416 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 UNC50Q53HI1 259 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 SPIN4Q56A73 249 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 BIVMQ86UB2 503 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 UHMK1Q8TAS1 419 aaKnown RBP17.52■□□□□ 0.4
TRAF4-216ENST00000586813 EFHD2Q96C19 240 aaPredicted RBP17.52■□□□□ 0.4
TRAF4-216ENST00000586813 SLC35C2Q9NQQ7 365 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 GIMAP4Q9NUV9 329 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 NDRG3Q9UGV2 375 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 DMGDHQ9UI17 866 aaKnown RBP17.52■□□□□ 0.4
TRAF4-216ENST00000586813 TESMINQ9Y4I5 508 aa17.52■□□□□ 0.4
TRAF4-216ENST00000586813 A0A087WUV0 522 aaPredicted RBP17.51■□□□□ 0.39
TRAF4-216ENST00000586813 C17orf51A8MQB3 221 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 ZIC3O60481 467 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 PLOD3O60568 738 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 ULK1O75385 1050 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 SNRPAP09012 282 aaKnown RBP17.51■□□□□ 0.39
TRAF4-216ENST00000586813 CTAGE8P0CG41 777 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 TAC1P20366 129 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 ECHS1P30084 290 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 HMOX2P30519 316 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 TIA1P31483 386 aaKnown RBP eCLIP17.51■□□□□ 0.39
TRAF4-216ENST00000586813 HTR6P50406 440 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 B3GALT5-AS1P59052 145 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 ACSM2AQ08AH3 577 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 BCL2A1Q16548 175 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 ACSM2BQ68CK6 577 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 P4HA3Q7Z4N8 544 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 SLC44A2Q8IWA5 706 aaPredicted RBP17.51■□□□□ 0.39
TRAF4-216ENST00000586813 CTAGE4Q8IX94 777 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 FAM9CQ8IZT9 166 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 OR7G2Q8NG99 324 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 OR4K17Q8NGC6 315 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 OR4N2Q8NGD1 307 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 METTL6Q8TCB7 284 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 C16orf78Q8WTQ4 265 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 IFT81Q8WYA0 676 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 MTBPQ96DY7 904 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 APIPQ96GX9 242 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 C18orf12Q96KH6 178 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 EBPLQ9BY08 206 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 TMEM216Q9P0N5 145 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 SENP1Q9P0U3 644 aa17.51■□□□□ 0.39
TRAF4-216ENST00000586813 EIF3LQ9Y262 564 aaKnown RBP17.51■□□□□ 0.39
TRAF4-216ENST00000586813 PCNX3Q9H6A9 2034 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 MSTNO14793 375 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 CASKO14936 926 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 CRHP06850 196 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 EVI2BP34910 448 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 DSCR4P56555 118 aaPredicted RBP17.5■□□□□ 0.39
TRAF4-216ENST00000586813 MRPS22P82650 360 aaKnown RBP17.5■□□□□ 0.39
TRAF4-216ENST00000586813 OR2A2Q6IF42 318 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 CXorf67Q86X51 503 aaPredicted RBP17.5■□□□□ 0.39
TRAF4-216ENST00000586813 UBQLNLQ8IYU4 475 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 C11orf24Q96F05 449 aaPredicted RBP17.5■□□□□ 0.39
TRAF4-216ENST00000586813 SMR3AQ99954 134 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 STMN4Q9H169 189 aaPredicted RBP17.5■□□□□ 0.39
TRAF4-216ENST00000586813 TAS2R9Q9NYW1 312 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 PPP4R1LQ9P1A2 415 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 OR10H1Q9Y4A9 318 aa17.5■□□□□ 0.39
TRAF4-216ENST00000586813 NSD1Q96L73 2696 aaPredicted RBP17.5■□□□□ 0.39
TRAF4-216ENST00000586813 EXOC1LA0A1B0GW35 172 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 SLC22A20A6NK97 555 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 SCO2O43819 266 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 DLX3O60479 287 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 SMNDC1O75940 238 aaKnown RBP eCLIP17.49■□□□□ 0.393e-7■■■■□ 21.5
TRAF4-216ENST00000586813 URI1O94763 535 aaPredicted RBP17.49■□□□□ 0.39
TRAF4-216ENST00000586813 MPIP34949 423 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 NKX6-1P78426 367 aaPredicted RBP17.49■□□□□ 0.39
TRAF4-216ENST00000586813 PSG6Q00889 435 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 ZNF155Q12901 538 aaPredicted RBP17.49■□□□□ 0.39
TRAF4-216ENST00000586813 WHAMMP3Q1A5X7 153 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 GALNT18Q6P9A2 607 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 CHMP1BQ7LBR1 199 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 MMGT1Q8N4V1 131 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 CNEP1R1Q8N9A8 125 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 FADS6Q8N9I5 356 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 NOA1Q8NC60 698 aaKnown RBP17.49■□□□□ 0.39
TRAF4-216ENST00000586813 STARD4Q96DR4 205 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 SHCBP1LQ9BZQ2 653 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 NFU1Q9UMS0 254 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 STK38LQ9Y2H1 464 aa17.49■□□□□ 0.39
TRAF4-216ENST00000586813 COQ9O75208 318 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 ENO1P06733 434 aaKnown RBP17.48■□□□□ 0.39
TRAF4-216ENST00000586813 INHBBP09529 407 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 PEPDP12955 493 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 IMPDH1P20839 514 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 ATP5F1P24539 256 aaPredicted RBP17.48■□□□□ 0.39
TRAF4-216ENST00000586813 ADSLP30566 484 aaPredicted RBP17.48■□□□□ 0.39
TRAF4-216ENST00000586813 GSTM5P46439 218 aa17.48■□□□□ 0.39
TRAF4-216ENST00000586813 PCYT1AP49585 367 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms