RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 NOP16Q9Y3C1 178 aaKnown RBP11.38□□□□□ -0.59
ERBB2-206ENST00000578373 C1orf105O95561 183 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 PPP1R3DO95685 299 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 AGR2O95994 175 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 ITGAMP11215 1152 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 APEX1P27695 318 aaKnown RBP11.38□□□□□ -0.59
ERBB2-206ENST00000578373 LCN1P31025 176 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 PTGS2P35354 604 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 PSMB10P40306 273 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 GRSF1Q12849 480 aaKnown RBP eCLIP11.38□□□□□ -0.59
ERBB2-206ENST00000578373 WASH2PQ6VEQ5 465 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 ZNF615Q8N8J6 731 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 SETD7Q8WTS6 366 aaKnown RBP11.38□□□□□ -0.59
ERBB2-206ENST00000578373 SPRYD4Q8WW59 207 aaPredicted RBP11.38□□□□□ -0.59
ERBB2-206ENST00000578373 DEDD2Q8WXF8 326 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 ZNF419Q96HQ0 510 aaPredicted RBP11.38□□□□□ -0.59
ERBB2-206ENST00000578373 OR2B2Q9GZK3 357 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 TRPV4Q9HBA0 871 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 RANGRFQ9HD47 186 aaPredicted RBP11.38□□□□□ -0.59
ERBB2-206ENST00000578373 TEX10Q9NXF1 929 aaPredicted RBP11.38□□□□□ -0.59
ERBB2-206ENST00000578373 LAMP5Q9UJQ1 280 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 PCDHGA3Q9Y5H0 932 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 PCM1Q15154 2024 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 ANKRD28O15084 1053 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 ITGBL1O95965 494 aaPredicted RBP11.38□□□□□ -0.59
ERBB2-206ENST00000578373 PVRP15151 417 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 DDCP20711 480 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 GP2P55259 537 aaKnown RBP11.38□□□□□ -0.59
ERBB2-206ENST00000578373 TAP2Q03519 686 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 SQSTM1Q13501 440 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 UBXN2BQ14CS0 331 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 TCEAL5Q5H9L2 206 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 DNAJC5GQ8N7S2 189 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 ACOT4Q8N9L9 421 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 OR2T35Q8NGX2 323 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 PTCHD1Q96NR3 888 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 OR2M4Q96R27 311 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 RNF121Q9H920 327 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 MED11Q9P086 117 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 COPS7AQ9UBW8 275 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 UGT2A1Q9Y4X1 527 aa11.38□□□□□ -0.59
ERBB2-206ENST00000578373 SCDO00767 359 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 VEGFDO43915 354 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SPARCP09486 303 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 HOXD8P13378 290 aaPredicted RBP11.37□□□□□ -0.59
ERBB2-206ENST00000578373 NDUFS1P28331 727 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 TBCEQ15813 527 aaPredicted RBP11.37□□□□□ -0.59
ERBB2-206ENST00000578373 PYCR3Q53H96 274 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 NUP54Q7Z3B4 507 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SLC39A11Q8N1S5 342 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SLC41A3Q96GZ6 507 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 OR4K3Q96R72 315 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 C11orf49Q9H6J7 331 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 TM7SF3Q9NS93 570 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 NDUFAF4Q9P032 175 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 CA5BQ9Y2D0 317 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 ASXL3Q9C0F0 2248 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 NUPL2O15504 423 aaKnown RBP11.37□□□□□ -0.59
ERBB2-206ENST00000578373 PEPDP12955 493 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 NKG7Q16617 165 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 AGAP6Q5VW22 663 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 PPP2R2DQ66LE6 453 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 MSANTD1Q6ZTZ1 278 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 TRIM46Q7Z4K8 759 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SDR16C5Q8N3Y7 309 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 AGAP4Q96P64 663 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 KATNBL1Q9H079 304 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 CXorf36Q9H7Y0 433 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SLC6A13Q9NSD5 602 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 LIPT1Q9Y234 373 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 MAST2Q6P0Q8 1798 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 OR2AT4A6NND4 320 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SLC6A9P48067 706 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 RPL34P49207 117 aaKnown RBP11.37□□□□□ -0.59
ERBB2-206ENST00000578373 CXCR4P61073 352 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 CHRNEQ04844 493 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 CST6Q15828 149 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SLC14A2Q15849 920 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 ALG10BQ5I7T1 473 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 TMEM69Q5SWH9 247 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 IQCF2Q8IXL9 164 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SYNPOQ8N3V7 929 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 LRIG1Q96JA1 1093 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SPATA9Q9BWV2 254 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SLC25A18Q9H1K4 315 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 SYNPO2LQ9H987 977 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 POT1Q9NUX5 634 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 GRHPRQ9UBQ7 328 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 ZNF225Q9UK10 706 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 PCDHGB1Q9Y5G3 927 aa11.37□□□□□ -0.59
ERBB2-206ENST00000578373 OR14I1A6ND48 311 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 HIDE1A8MVS5 230 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 SCO2O43819 266 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 ANXA3P12429 323 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 OR3A3P47888 321 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 OR3A2P47893 321 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 ANKRD54Q6NXT1 300 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 NRSN1Q8IZ57 195 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 OR2L3Q8NG85 312 aa11.36□□□□□ -0.59
ERBB2-206ENST00000578373 PEX11GQ96HA9 241 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms