RNA–Protein interactions for RNA: ENST00000577524.5

ARHGAP28-208, Transcript of Rho GTPase activating protein 28, human

TSL 5

Gene ARHGAP28, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGAP28-208	ENST00000577524	PLCZ1	Q86YW0	608 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	NUDCD3	Q8IVD9	361 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CHERP	Q8IWX8	916 aa	Known RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ULK2	Q8IYT8	1036 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	KIRREL3	Q8IZU9	778 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	MEIOB	Q8N635	442 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	NATD1	Q8N6N6	113 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	BANP	Q8N9N5	519 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	FAM83F	Q8NEG4	500 aa	Predicted RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	AGR3	Q8TD06	166 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	TCP10L	Q8TDR4	215 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	GPR151	Q8TDV0	419 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	TWIST2	Q8WVJ9	160 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SLC9A6	Q92581	669 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	JADE3	Q92613	823 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	HGD	Q93099	445 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	GFM2	Q969S9	779 aa	Known RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	EFHD2	Q96C19	240 aa	Predicted RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CTHRC1	Q96CG8	243 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SLC35A4	Q96G79	324 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	TSSK3	Q96PN8	268 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	BTBD9	Q96Q07	612 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	TRIB1	Q96RU8	372 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	NODAL	Q96S42	347 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CCT7	Q99832	543 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	TBL1XR1	Q9BZK7	514 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	UCK2	Q9BZX2	261 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	C12orf65	Q9H3J6	166 aa	Known RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ACBD3	Q9H3P7	528 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	REEP4	Q9H6H4	257 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ANKZF1	Q9H8Y5	726 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	KCNK9	Q9NPC2	374 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	EQTN	Q9NQ60	294 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SERHL	Q9NQF3	203 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ATAD3A	Q9NVI7	634 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	MKS1	Q9NXB0	559 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	TAS2R10	Q9NYW0	307 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SPRR3	Q9UBC9	169 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	FOXD3	Q9UJU5	478 aa	Predicted RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ITGB1BP2	Q9UKP3	347 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CBLC	Q9ULV8	474 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	C19orf53	Q9UNZ5	99 aa	Predicted RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	EXO1	Q9UQ84	846 aa	Known RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	EIF3L	Q9Y262	564 aa	Known RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	DTX4	Q9Y2E6	619 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	GPR55	Q9Y2T6	319 aa	Predicted RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SLC6A5	Q9Y345	797 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	TRAF6	Q9Y4K3	522 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	WIF1	Q9Y5W5	379 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524		V9GYY5	206 aa	Predicted RBP	4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	BOD1L1	Q8NFC6	3051 aa		4.95	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ZGRF1	Q86YA3	2104 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SETX	Q7Z333	2677 aa	Known RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	USP9Y	O00507	2555 aa	Predicted RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SPTAN1	Q13813	2472 aa	Known RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524		A0A0G2JNJ9	132 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	WDR91	A4D1P6	747 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	MYO1G	B0I1T2	1018 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	EEF1E1-BLOC1S5	C9J1V9	151 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	C19orf84	I3L1E1	186 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PLOD2	O00469	737 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CFLAR	O15519	480 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	EEF1E1	O43324	174 aa	Known RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	EMC8	O43402	210 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PEX11A	O75192	247 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ERLIN1	O75477	346 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SKAP2	O75563	359 aa	Predicted RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	LYPLA1	O75608	230 aa	Predicted RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SNUPN	O95149	360 aa	Known RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	EPPIN	O95925	133 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	KRT16	P08779	473 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ALOX5	P09917	674 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PEPD	P12955	493 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	BMP7	P18075	431 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	HK1	P19367	917 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	ATP6V1C1	P21283	382 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	BMP5	P22003	454 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	TCEA1	P23193	301 aa	Known RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PRPH2	P23942	346 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CHM	P24386	653 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	GRK2	P25098	689 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CTSS	P25774	331 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	DPP4	P27487	766 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PTPN6	P29350	595 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	SRD5A2	P31213	254 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	GABRA3	P34903	492 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	OPRM1	P35372	400 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	KIR3DL1	P43629	444 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CPA2	P48052	419 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PRIM2	P49643	509 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	DIO3	P55073	304 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	DSCR4	P56555	118 aa	Predicted RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CORO7	P57737	925 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	RPS3A	P61247	264 aa	Known RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	PRR5	P85299	388 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	DUSP2	Q05923	314 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	CRYZ	Q08257	329 aa	Known RBP	4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	MGAT2	Q10469	447 aa		4.94	□□□□□ -1.62
ARHGAP28-208	ENST00000577524	STX5	Q13190	355 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms