RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 SPTAN1Q13813 2472 aaKnown RBP16.22■□□□□ 0.19
CTDNEP1-207ENST00000572043 KDM4EB2RXH2 506 aaPredicted RBP16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 ITM2AO43736 263 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 SCO2O43819 266 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 SLITRK5O94991 958 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 CYP4B1P13584 511 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 GABRA1P14867 456 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 BMP7P18075 431 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 MANFP55145 182 aaKnown RBP16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 GAB1Q13480 694 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 ZNHIT3Q15649 155 aaPredicted RBP16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 XKR7Q5GH72 579 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 DCST1Q5T197 706 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 TMEM81Q6P7N7 255 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 OR14L1PQ8NHC6 308 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 FBXO30Q8TB52 745 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 UGT2B28Q9BY64 529 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 Q9N2J8 555 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 FBXL2Q9UKC9 423 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 CBLCQ9ULV8 474 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 WIF1Q9Y5W5 379 aa16.21■□□□□ 0.19
CTDNEP1-207ENST00000572043 TMEM114B3SHH9 223 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 GABRA3P34903 492 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 PNLIPRP2P54317 469 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 STX5Q13190 355 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 PDE7AQ13946 482 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 PDCD2Q16342 344 aaPredicted RBP16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 ATP6AP1LQ52LC2 224 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 MEX3BQ6ZN04 569 aaKnown RBP16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 PLCZ1Q86YW0 608 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 LIX1LQ8IVB5 337 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 FNDC5Q8NAU1 212 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 OR6Y1Q8NGX8 325 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 ZFP28Q8NHY6 868 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 NUDT8Q8WV74 236 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 PIK3R3Q92569 461 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 ABTB1Q969K4 478 aaPredicted RBP16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 TUBGCP3Q96CW5 907 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 ZBED6CLQ96FA7 236 aaPredicted RBP16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 PAIP2Q9BPZ3 127 aaKnown RBP16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 KCNJ16Q9NPI9 418 aa16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 DIDO1Q9BTC0 2240 aaKnown RBP16.2■□□□□ 0.18
CTDNEP1-207ENST00000572043 SPTBN1Q01082 2364 aaKnown RBP16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 GXYLT2A0PJZ3 443 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 CBR3O75828 277 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 TOXO94900 526 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 PSMG1O95456 288 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 SERPINE1P05121 402 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 PRPS2P11908 318 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 GRK2P25098 689 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 MAPK1P28482 360 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 EVI2BP34910 448 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 PTGER4P35408 488 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 HPCAL1P37235 193 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 ASMTP46597 345 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 ZFP36L2P47974 494 aaKnown RBP16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 PTGR1Q14914 329 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 DECR1Q16698 335 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 CYP27C1Q4G0S4 372 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 ACSF3Q4G176 576 aaPredicted RBP16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 IL23RQ5VWK5 629 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 VASNQ6EMK4 673 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 SEM1Q6ZVN7 128 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 GALNT10Q86SR1 603 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 ZNF781Q8N8C0 355 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 NUP43Q8NFH3 380 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 OR7A2PQ8NGA2 310 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 OTUB1Q96FW1 271 aaPredicted RBP16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 LMF2Q9BU23 707 aaKnown RBP16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 NPDC1Q9NQX5 325 aaPredicted RBP16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 TAS2R10Q9NYW0 307 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 DKKL1Q9UK85 242 aa16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 RPH3AQ9Y2J0 694 aaPredicted RBP16.19■□□□□ 0.18
CTDNEP1-207ENST00000572043 AHRRA9YTQ3 701 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 SCAMP2O15127 329 aaKnown RBP16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 HOXD4P09016 255 aaPredicted RBP16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 GCKP35557 465 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 ABCE1P61221 599 aaKnown RBP16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 PSPHP78330 225 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 MRPS22P82650 360 aaKnown RBP16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 SRYQ05066 204 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 MPP2Q14168 576 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 C6orf136Q5SQH8 315 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 GDF7Q7Z4P5 450 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 R3HCC1LQ7Z5L2 792 aaKnown RBP16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 PM20D2Q8IYS1 436 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 ANKRD42Q8N9B4 389 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 OR4K17Q8NGC6 315 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 GPR151Q8TDV0 419 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 SLC9A6Q92581 669 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 RMND5BQ96G75 393 aaPredicted RBP16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 WDYHV1Q96HA8 205 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 TRIB1Q96RU8 372 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 YIPF4Q9BSR8 244 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 TRIM8Q9BZR9 551 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 PPP4R1LQ9P1A2 415 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 EML6Q6ZMW3 1958 aa16.18■□□□□ 0.18
CTDNEP1-207ENST00000572043 B4DXG7 233 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 TM9SF1O15321 606 aa16.17■□□□□ 0.18
CTDNEP1-207ENST00000572043 GMFGO60234 142 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms