RNA–Protein interactions for RNA: ENST00000571212.1

KARSP3-201, Transcript of lysyl-tRNA synthetase pseudogene 3, humanhuman

BASIC

Gene KARSP3, Length 1,504 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP3-201ENST00000571212 CFAP36Q96G28 342 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 VPS39Q96JC1 886 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 ELMO2Q96JJ3 720 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 GPR78Q96P69 363 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 PANX3Q96QZ0 392 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 PAFAH2Q99487 392 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 PRPF18Q99633 342 aaKnown RBP4.52□□□□□ -1.69
KARSP3-201ENST00000571212 HGH1Q9BTY7 390 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 CRB3Q9BUF7 120 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 WDR12Q9GZL7 423 aaKnown RBP4.52□□□□□ -1.69
KARSP3-201ENST00000571212 RAB33BQ9H082 229 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 TPK1Q9H3S4 243 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 OSGEPL1Q9H4B0 414 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 COG4Q9H9E3 785 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 PDE7BQ9NP56 450 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 FBXO6Q9NRD1 293 aaPredicted RBP4.52□□□□□ -1.69
KARSP3-201ENST00000571212 ZNF624Q9P2J8 865 aaPredicted RBP4.52□□□□□ -1.69
KARSP3-201ENST00000571212 GNPTGQ9UJJ9 305 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 RARRES3Q9UL19 164 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 SLC39A10Q9ULF5 831 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 LRCH1Q9Y2L9 728 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 CRYL1Q9Y2S2 319 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 SVILO95425 2214 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 CELSR2Q9HCU4 2923 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 CRYBG3Q68DQ2 2970 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 FER1L5A0AVI2 2057 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 C2CD3Q4AC94 2353 aa4.52□□□□□ -1.69
KARSP3-201ENST00000571212 IGLV5-39A0A0G2JS06 123 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 LOC105371267A0A1B0GV96 52 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 ARGFXA6NJG6 315 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 OR2AG2A6NM03 316 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 PDZK1P1A8MUH7 402 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 TCP11X1B4DZS4 312 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 ZNF814B7Z6K7 855 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 M0QX08 132 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 PRYO14603 147 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 SLC16A5O15375 505 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 KLK8O60259 260 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 CCNT2O60583 730 aaKnown RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 CDH16O75309 829 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 NIPSNAP2O75323 286 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 PSIP1O75475 530 aaKnown RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 LDLRP01130 860 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 SLC4A1P02730 911 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 SLC35E2BP0CK96 405 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 MPC1LP0DKB6 136 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 ENO3P13929 434 aaPredicted RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 EGR1P18146 543 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 GNAZP19086 355 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 CALB2P22676 271 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 PDHA2P29803 388 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 FMO4P31512 558 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 CCL11P51671 97 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 EIF3BP55884 814 aaKnown RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 TAS2R39P59534 338 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 B2MP61769 119 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 HPCAP84074 193 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 ACY1Q03154 408 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 SLC18A2Q05940 514 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 NFE2L1Q14494 772 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 MAPKAPK3Q16644 382 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 PPP1R3AQ16821 1122 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 EIF2S3LQ2VIR3 472 aaKnown RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 ACSBG2Q5FVE4 666 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 CDKL4Q5MAI5 379 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 ABLIM2Q6H8Q1 611 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 LRRC8EQ6NSJ5 796 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 PWWP2BQ6NUJ5 590 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 JMJD6Q6NYC1 403 aaPredicted RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 FAM57BQ71RH2 274 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 CCDC25Q86WR0 208 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 KMT5CQ86Y97 462 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 KLHDC8AQ8IYD2 350 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 CENPLQ8N0S6 344 aaPredicted RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 SIDT2Q8NBJ9 832 aaKnown RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 TNIP2Q8NFZ5 429 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 ASZ1Q8WWH4 475 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 SGCDQ92629 289 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 ZNF75CPQ92670 426 aaPredicted RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 RSC1A1Q92681 617 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 INPP5DQ92835 1189 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 CXorf40BQ96DE9 158 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 CHMP6Q96FZ7 201 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 PGM2Q96G03 612 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 DCUN1D1Q96GG9 259 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 TMEM41AQ96HV5 264 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 SLC41A2Q96JW4 573 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 MAELQ96JY0 434 aaKnown RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 RAB3IPQ96QF0 476 aaPredicted RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 GATA5Q9BWX5 397 aaPredicted RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 DERL2Q9GZP9 239 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 ING2Q9H160 280 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 HIPK2Q9H2X6 1198 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 TFB2MQ9H5Q4 396 aaKnown RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 CCDC134Q9H6E4 229 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 VPS37BQ9H9H4 285 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 PPANQ9NQ55 473 aaKnown RBP4.51□□□□□ -1.69
KARSP3-201ENST00000571212 PFDN4Q9NQP4 134 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 FAIMQ9NVQ4 179 aa4.51□□□□□ -1.69
KARSP3-201ENST00000571212 TAS2R13Q9NYV9 303 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms