RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 WISP2O76076 250 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 CD46P15529 392 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 DRD4P21917 467 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 FRKP42685 505 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-205ENST00000571028 SSR4P51571 173 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 WNT3P56703 355 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 C21orf58P58505 322 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 SQLEQ14534 574 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 TIGD2Q4W5G0 525 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 ZNF468Q5VIY5 522 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-205ENST00000571028 ANXA8L1Q5VT79 327 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 IL20RBQ6UXL0 311 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 SPATA21Q7Z572 469 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 CLEC4FQ8N1N0 589 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 TMEM178AQ8NBL3 297 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 NUP43Q8NFH3 380 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 OR8K3Q8NH51 312 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 FBXO30Q8TB52 745 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 ASB15Q8WXK1 588 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 VPS33AQ96AX1 596 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 OTUB1Q96FW1 271 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-205ENST00000571028 RASL10BQ96S79 203 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 UTP23Q9BRU9 249 aaKnown RBP12.25□□□□□ -0.45
CCDC40-205ENST00000571028 YIPF4Q9BSR8 244 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 GSX1Q9H4S2 264 aaPredicted RBP12.25□□□□□ -0.45
CCDC40-205ENST00000571028 C3orf14Q9HBI5 128 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 SLC24A3Q9HC58 644 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 FAM53CQ9NYF3 392 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 TAS2R9Q9NYW1 312 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 ZIM2Q9NZV7 527 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 PRODH2Q9UF12 536 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 ERVK-11Q9UQG0 969 aa12.25□□□□□ -0.45
CCDC40-205ENST00000571028 PRSS51A0A1B0GVH4 220 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 FAM234BA2RU67 622 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 FAM90A27PA6NNH2 459 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 EMC8O43402 210 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 ASNA1O43681 348 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 PLOD3O60568 738 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 OR6B1O95007 311 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 PGRP06401 933 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 CD96P40200 585 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 SOX3P41225 446 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 EMDP50402 254 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 HBA1P69905 142 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 TP53BP2Q13625 1128 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 TUBA3CQ13748 450 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 DPY19L1Q2PZI1 675 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 SPINK14Q6IE38 97 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 TUBA3EQ6PEY2 450 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 DNAJC14Q6Y2X3 702 aaPredicted RBP12.24□□□□□ -0.45
CCDC40-205ENST00000571028 CAMKMTQ7Z624 323 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 DOLPP1Q86YN1 238 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 NATD1Q8N6N6 113 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 GLB1L3Q8NCI6 653 aaPredicted RBP12.24□□□□□ -0.45
CCDC40-205ENST00000571028 OR5M3Q8NGP4 307 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 NUBPLQ8TB37 319 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 SLC22A8Q8TCC7 542 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 C10orf82Q8WW14 230 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 ASB5Q8WWX0 329 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 JADE3Q92613 823 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 NRGNQ92686 78 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 NINJ1Q92982 152 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 INPP5KQ9BT40 448 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 NXF5Q9H1B4 397 aaKnown RBP12.24□□□□□ -0.45
CCDC40-205ENST00000571028 CXXC4Q9H2H0 198 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 CXorf36Q9H7Y0 433 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 FOLH1BQ9HBA9 442 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 SIRT3Q9NTG7 399 aaPredicted RBP12.24□□□□□ -0.45
CCDC40-205ENST00000571028 ZCCHC3Q9NUD5 404 aaKnown RBP12.24□□□□□ -0.45
CCDC40-205ENST00000571028 CCM2LQ9NUG4 571 aaPredicted RBP12.24□□□□□ -0.45
CCDC40-205ENST00000571028 KCNN3Q9UGI6 736 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 EDARQ9UNE0 448 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 C19orf53Q9UNZ5 99 aaPredicted RBP12.24□□□□□ -0.45
CCDC40-205ENST00000571028 CFL2Q9Y281 166 aa12.24□□□□□ -0.45
CCDC40-205ENST00000571028 YARS2Q9Y2Z4 477 aaKnown RBP12.24□□□□□ -0.45
CCDC40-205ENST00000571028 A0A087WV62 115 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 CCDC154A6NI56 674 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 A8MVJ9 347 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 PLOD2O00469 737 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 RNASET2O00584 256 aaKnown RBP12.23□□□□□ -0.45
CCDC40-205ENST00000571028 ZNF354AO60765 605 aaPredicted RBP12.23□□□□□ -0.45
CCDC40-205ENST00000571028 ERN1O75460 977 aaKnown RBP12.23□□□□□ -0.45
CCDC40-205ENST00000571028 SLITRK5O94991 958 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 IL6P05231 212 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 GSNP06396 782 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 ZNF24P17028 368 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 RFX3P48380 749 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 CCT3P49368 545 aaKnown RBP12.23□□□□□ -0.45
CCDC40-205ENST00000571028 CYB561P49447 251 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 CASP9P55211 416 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 CORO7P57737 925 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 HSF1Q00613 529 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 OR1C1Q15619 314 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 PIGGQ5H8A4 983 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 C6orf10Q5SRN2 563 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 GK5Q6ZS86 529 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 ZNF621Q6ZSS3 439 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 SLC44A2Q8IWA5 706 aaPredicted RBP12.23□□□□□ -0.45
CCDC40-205ENST00000571028 OR2L13Q8N349 312 aa12.23□□□□□ -0.45
CCDC40-205ENST00000571028 HORMAD2Q8N7B1 307 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms