RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 MRTO4Q9UKD2 239 aaKnown RBP16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 EIF3LQ9Y262 564 aaKnown RBP16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 C15orf41Q9Y2V0 281 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 RAP2CQ9Y3L5 183 aa16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 UTP20O75691 2785 aaKnown RBP16.78■□□□□ 0.28
SYNGR3-204ENST00000564642 PHF3Q92576 2039 aaKnown RBP16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 NBPF19A0A087WUL8 3843 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 CLDN14O95500 239 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 BGNP21810 368 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 ACVR2AP27037 513 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 PTGDSP41222 190 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 CDK9P50750 372 aaKnown RBP16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 RPL14P50914 215 aaKnown RBP16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 PRKAG1P54619 331 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 MAD2L1Q13257 205 aaPredicted RBP16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 PDCD2Q16342 344 aaPredicted RBP16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 CYP27C1Q4G0S4 372 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 BEND6Q5SZJ8 279 aaPredicted RBP16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 FNDC7Q5VTL7 733 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 KIRREL3Q8IZU9 778 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 CEP70Q8NHQ1 597 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 CA5BP1Q8WTZ4 195 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 EFHD2Q96C19 240 aaPredicted RBP16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 PRPF18Q99633 342 aaKnown RBP16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 C3orf14Q9HBI5 128 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 Q9N2J8 555 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 CHST11Q9NPF2 352 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 SPRR3Q9UBC9 169 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 ATP6V1HQ9UI12 483 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 CBLCQ9ULV8 474 aa16.77■□□□□ 0.28
SYNGR3-204ENST00000564642 C15orf38-AP3S2A0A0A6YYH1 394 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 TTC36A6NLP5 189 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 ENO4A6NNW6 628 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 SNPHO15079 494 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 SCAMP2O15127 329 aaKnown RBP16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 WDR1O75083 606 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 PSMG1O95456 288 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 HPNP05981 417 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 GABRA1P14867 456 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 ENDOUP21128 410 aaKnown RBP16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 PTPN6P29350 595 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 FRKP42685 505 aaPredicted RBP16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 PMPCAQ10713 525 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 DECR1Q16698 335 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 ZNF630Q2M218 657 aaPredicted RBP16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 ACAD11Q709F0 780 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 SZRD1Q7Z422 152 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 MARVELD2Q8N4S9 558 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 OR7A2PQ8NGA2 310 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 NTNG2Q96CW9 530 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 PPP1R36Q96LQ0 422 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 C20orf27Q9GZN8 174 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 UBQLN3Q9H347 655 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 ATAD3AQ9NVI7 634 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 MAPRE3Q9UPY8 281 aa16.76■□□□□ 0.27
SYNGR3-204ENST00000564642 PCNX1Q96RV3 2341 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 CBR3O75828 277 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 HOXD4P09016 255 aaPredicted RBP16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 PRPS1L1P21108 318 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 GRNP28799 593 aaKnown RBP16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 GABRA3P34903 492 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 PSMD4P55036 377 aaKnown RBP16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 GAB1Q13480 694 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 PTGR1Q14914 329 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 VPS26BQ4G0F5 336 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 CPTPQ5TA50 214 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 B3GNT6Q6ZMB0 384 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 WDR53Q7Z5U6 358 aaPredicted RBP16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 RPRMLQ8N4K4 120 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 NUP43Q8NFH3 380 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 OR10Q1Q8NGQ4 319 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 ASB5Q8WWX0 329 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 DTNBP1Q96EV8 351 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 LMF2Q9BU23 707 aaKnown RBP16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 EQTNQ9NQ60 294 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 NOP53Q9NZM5 478 aaKnown RBP16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 WIF1Q9Y5W5 379 aa16.75■□□□□ 0.27
SYNGR3-204ENST00000564642 CREBBPQ92793 2442 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 A0A1W2PRB8 838 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 TMEM120BA0PK00 339 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 HNRNPRO43390 633 aaKnown RBP16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 EMC8O43402 210 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 CYP4B1P13584 511 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 EFNA1P20827 205 aaPredicted RBP16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 GCKP35557 465 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 RFX3P48380 749 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 NUP107P57740 925 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 MAGOHP61326 146 aaKnown RBP16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 EMX2Q04743 252 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 MLC1Q15049 377 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 SMU1Q2TAY7 513 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 EIPR1Q53HC9 387 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 WIPI1Q5MNZ9 446 aaPredicted RBP16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 C1orf185Q5T7R7 199 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 PLCZ1Q86YW0 608 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 NATD1Q8N6N6 113 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 CDRT4Q8N9R6 151 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 MGARPQ8TDB4 240 aa16.74■□□□□ 0.27
SYNGR3-204ENST00000564642 GPR151Q8TDV0 419 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms