RNA–Protein interactions for RNA: ENST00000563939.2

CBFB-204, Transcript of core-binding factor subunit beta, humanhuman

TSL 4

Gene CBFB, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFB-204ENST00000563939 ZNF407Q9C0G0 2248 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 HNRNPRO43390 633 aaKnown RBP17.54■□□□□ 0.4
CBFB-204ENST00000563939 TBX19O60806 448 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 HPNP05981 417 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 PRPS2P11908 318 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 BGNP21810 368 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 GRK2P25098 689 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 GABRA3P34903 492 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 PTGDSP41222 190 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 RFX3P48380 749 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 SLC1A6P48664 564 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 NUP107P57740 925 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 STX3Q13277 289 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 TMEM81Q6P7N7 255 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 B3GNT6Q6ZMB0 384 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 CCDC71Q8IV32 467 aaPredicted RBP17.54■□□□□ 0.4
CBFB-204ENST00000563939 ZNF781Q8N8C0 355 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 OR7A2PQ8NGA2 310 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 MARVELD3Q96A59 401 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 ZNF764Q96H86 408 aaPredicted RBP17.54■□□□□ 0.4
CBFB-204ENST00000563939 UBQLN3Q9H347 655 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 RUBCNLQ9H714 662 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 C3orf14Q9HBI5 128 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 Q9N2J8 555 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 SERHLQ9NQF3 203 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 CBLCQ9ULV8 474 aa17.54■□□□□ 0.4
CBFB-204ENST00000563939 EIF3LQ9Y262 564 aaKnown RBP17.54■□□□□ 0.4
CBFB-204ENST00000563939 SNPHO15079 494 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 WDR1O75083 606 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 CBR3O75828 277 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 SNRPB2P08579 225 aaKnown RBP17.53■□□□□ 0.4
CBFB-204ENST00000563939 HOXD4P09016 255 aaPredicted RBP17.53■□□□□ 0.4
CBFB-204ENST00000563939 DHRS4L1P0CG22 281 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 PTPN6P29350 595 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 RPL3P39023 403 aaKnown RBP17.53■□□□□ 0.4
CBFB-204ENST00000563939 PDE7AQ13946 482 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 PDCD2Q16342 344 aaPredicted RBP17.53■□□□□ 0.4
CBFB-204ENST00000563939 DECR1Q16698 335 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 EIPR1Q53HC9 387 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 WIPI1Q5MNZ9 446 aaPredicted RBP17.53■□□□□ 0.4
CBFB-204ENST00000563939 OR5M10Q6IEU7 315 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 YRDCQ86U90 279 aaKnown RBP17.53■□□□□ 0.4
CBFB-204ENST00000563939 CEP70Q8NHQ1 597 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 ASB5Q8WWX0 329 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 NTNG2Q96CW9 530 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 PRPF18Q99633 342 aaKnown RBP17.53■□□□□ 0.4
CBFB-204ENST00000563939 TTYH2Q9BSA4 534 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 ACSS1Q9NUB1 689 aaPredicted RBP17.53■□□□□ 0.4
CBFB-204ENST00000563939 ATP6V1HQ9UI12 483 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 MRTO4Q9UKD2 239 aaKnown RBP17.53■□□□□ 0.4
CBFB-204ENST00000563939 RNF6Q9Y252 685 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.53■□□□□ 0.4
CBFB-204ENST00000563939 RAP2CQ9Y3L5 183 aa17.53■□□□□ 0.4
CBFB-204ENST00000563939 CENPEQ02224 2701 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 SCAMP2O15127 329 aaKnown RBP17.52■□□□□ 0.4
CBFB-204ENST00000563939 GLI4P10075 376 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 CYP4B1P13584 511 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 GABRA1P14867 456 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 CHRNB4P30926 498 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 RPL14P50914 215 aaKnown RBP17.52■□□□□ 0.4
CBFB-204ENST00000563939 PTGR1Q14914 329 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 BEND6Q5SZJ8 279 aaPredicted RBP17.52■□□□□ 0.4
CBFB-204ENST00000563939 C1orf185Q5T7R7 199 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 CPTPQ5TA50 214 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 RTL6Q6ICC9 239 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 PLCZ1Q86YW0 608 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 WDSUB1Q8N9V3 476 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 FAM83FQ8NEG4 500 aaPredicted RBP17.52■□□□□ 0.4
CBFB-204ENST00000563939 NUP43Q8NFH3 380 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 GPR151Q8TDV0 419 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 TIMP4Q99727 224 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 C20orf27Q9GZN8 174 aa17.52■□□□□ 0.4
CBFB-204ENST00000563939 PCNX1Q96RV3 2341 aa17.52■□□□□ 0.39
CBFB-204ENST00000563939 A0A1W2PRB8 838 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 MAST4O15021 2626 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 EMC8O43402 210 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 SNUPNO95149 360 aaKnown RBP17.51■□□□□ 0.39
CBFB-204ENST00000563939 PSMG1O95456 288 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 LAMP1P11279 417 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 COX6B1P14854 86 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 PRPS1L1P21108 318 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 GCKP35557 465 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 MAD2L1Q13257 205 aaPredicted RBP17.51■□□□□ 0.39
CBFB-204ENST00000563939 VPS26BQ4G0F5 336 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 KRTCAP2Q8N6L1 136 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 OR14L1PQ8NHC6 308 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 LILRB4Q8NHJ6 448 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 MGARPQ8TDB4 240 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 NUDT8Q8WV74 236 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 SLC9A6Q92581 669 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 ABTB1Q969K4 478 aaPredicted RBP17.51■□□□□ 0.39
CBFB-204ENST00000563939 LMF2Q9BU23 707 aaKnown RBP17.51■□□□□ 0.39
CBFB-204ENST00000563939 ATAD3AQ9NVI7 634 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 UNC79Q9P2D8 2635 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 CAMK2AQ9UQM7 478 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 FAM215AQ9Y5M1 114 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 WIF1Q9Y5W5 379 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 SNX8Q9Y5X2 465 aa17.51■□□□□ 0.39
CBFB-204ENST00000563939 DNAJC13O75165 2243 aa17.5■□□□□ 0.39
CBFB-204ENST00000563939 GXYLT2A0PJZ3 443 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms