RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 LMO7DNF2Z398 122 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 SGCEO43556 437 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 FURINP09958 794 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 ARAFP10398 606 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 PSMA1P25786 263 aaKnown RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 RGS19P49795 217 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 ZNF41P51814 821 aaPredicted RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 CASP9P55211 416 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 DEFB110Q30KQ9 67 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 TRIM61Q5EBN2 209 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 KIAA1211LQ6NV74 962 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 TMEM64Q6YI46 380 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 ZNF600Q6ZNG1 722 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 KIF18BQ86Y91 864 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 LILRA3Q8N6C8 439 aaPredicted RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 AQP11Q8NBQ7 271 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 C19orf18Q8NEA5 215 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 FAM110BQ8TC76 370 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 MVB12AQ96EY5 273 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 MOGAT1Q96PD6 335 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 CDX2Q99626 313 aaPredicted RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 RPP25Q9BUL9 199 aaKnown RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 PPA2Q9H2U2 334 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 ABCB10Q9NRK6 738 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 DCAF13Q9NV06 445 aaKnown RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 CSNK1G3Q9Y6M4 447 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 SDK1Q7Z5N4 2213 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 MGAMO43451 1857 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 ANHXE9PGG2 379 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 H3BUI4 141 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 ALX3O95076 343 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 NPR2P20594 1047 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 DRD3P35462 400 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 SELENOWP63302 87 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 RNF4P78317 190 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 MFSD13AQ14CX5 517 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 OGFRL1Q5TC84 451 aaPredicted RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 DTWD1Q8N5C7 304 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 HTRA1Q92743 480 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 PNPLA2Q96AD5 504 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 PHF12Q96QT6 1004 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 PLAC1Q9HBJ0 212 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 A0A0A6YYC8 382 aaPredicted RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 LOC100130705A0A1B0GUX0 176 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 TCRBV3S1A0A5B6 114 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 I3L1I5 382 aaPredicted RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 WWP2O00308 870 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 EFEMP2O95967 443 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 KIR2DL1P43626 348 aaPredicted RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 XCR1P46094 333 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 FNTBP49356 437 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 ENTPD1P49961 510 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 NADK2Q4G0N4 442 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 IER5LQ5T953 404 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 PRAMEF8Q5VWM4 474 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 PRAMEF7Q5VXH5 474 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 FAM71E1Q6IPT2 247 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 VASH1Q7L8A9 365 aaPredicted RBP7.12□□□□□ -1.27
TCF4-216ENST00000562680 SSX9Q7RTT3 188 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 OR14A16Q8NHC5 309 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 THRSPQ92748 146 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 INPP5KQ9BT40 448 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 TVP23BQ9NYZ1 205 aa7.12□□□□□ -1.27
TCF4-216ENST00000562680 PSKH1P11801 424 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 GPR3P46089 330 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 MED22Q15528 200 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 TCEAL6Q6IPX3 200 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 UTS2BQ765I0 119 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 MAVSQ7Z434 540 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 PSMA8Q8TAA3 256 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 ELF4Q99607 663 aaPredicted RBP7.11□□□□□ -1.27
TCF4-216ENST00000562680 CRB3Q9BUF7 120 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 RBCK1Q9BYM8 510 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 TNFRSF10DQ9UBN6 386 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 B4GALT7Q9UBV7 327 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 CLEC4AQ9UMR7 237 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 SLC35A3Q9Y2D2 325 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 NOSIPQ9Y314 301 aaKnown RBP7.11□□□□□ -1.27
TCF4-216ENST00000562680 SLC22A7Q9Y694 548 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 EFCAB9A8MZ26 197 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 AIFM1O95831 613 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 NME1P15531 152 aaKnown RBP7.11□□□□□ -1.27
TCF4-216ENST00000562680 MRPL19P49406 292 aaKnown RBP7.11□□□□□ -1.27
TCF4-216ENST00000562680 RAB4BP61018 213 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 GAS6Q14393 721 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 Q6ZNX1 250 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 AHSA2Q719I0 299 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 OR8H3Q8N146 312 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 BTBD2Q9BX70 525 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 GAREM1Q9H706 876 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 NTN4Q9HB63 628 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 KLHL1Q9NR64 748 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 NKX1-2Q9UD57 310 aaPredicted RBP7.11□□□□□ -1.27
TCF4-216ENST00000562680 ACSL6Q9UKU0 697 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 SERTM1A2A2V5 107 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 TRAPPC13A5PLN9 417 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 SLC30A4O14863 429 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 TFPTP0C1Z6 253 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 CDK4P11802 303 aa7.11□□□□□ -1.27
TCF4-216ENST00000562680 PVRP15151 417 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms