RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 NUP54Q7Z3B4 507 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 ANKRD46Q86W74 232 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 SPPL2CQ8IUH8 684 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 DND1Q8IYX4 353 aaKnown RBP12.72□□□□□ -0.37
TPM1-230ENST00000561266 LRRC34Q8IZ02 419 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 GOLGA6L1Q8N7Z2 621 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 OR5AK3PQ8NH89 298 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 ZFP28Q8NHY6 868 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 LRRC8CQ8TDW0 803 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 THOC1Q96FV9 657 aaKnown RBP12.72□□□□□ -0.37
TPM1-230ENST00000561266 JSRP1Q96MG2 331 aaPredicted RBP12.72□□□□□ -0.37
TPM1-230ENST00000561266 COL21A1Q96P44 957 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 GNRHR2Q96P88 292 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 DOHHQ9BU89 302 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 DPY30Q9C005 99 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 BHLHE41Q9C0J9 482 aaPredicted RBP12.72□□□□□ -0.37
TPM1-230ENST00000561266 SERHL2Q9H4I8 314 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 ZFP64Q9NPA5 681 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 GPATCH2Q9NW75 528 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 SH3BGRL2Q9UJC5 107 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 TINAGQ9UJW2 476 aa12.72□□□□□ -0.37
TPM1-230ENST00000561266 NCOA6Q14686 2063 aaPredicted RBP12.72□□□□□ -0.37
TPM1-230ENST00000561266 KIAA1549Q9HCM3 1950 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 USP9YO00507 2555 aaPredicted RBP12.71□□□□□ -0.37
TPM1-230ENST00000561266 WIPF3A6NGB9 483 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 OR6C70A6NIJ9 312 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 CAPN14A8MX76 684 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 TP53I11O14683 189 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 GNB5O14775 395 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 SLC19A2O60779 497 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 NKX2-2O95096 273 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 LDLRP01130 860 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 HMGN2P05204 90 aaKnown RBP12.71□□□□□ -0.37
TPM1-230ENST00000561266 RPL3P39023 403 aaKnown RBP12.71□□□□□ -0.37
TPM1-230ENST00000561266 IDH3AP50213 366 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 EMC4Q5J8M3 183 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 NXNQ6DKJ4 435 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 APOOLQ6UXV4 268 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 Q6ZPB1 254 aaPredicted RBP12.71□□□□□ -0.37
TPM1-230ENST00000561266 SZRD1Q7Z422 152 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 SPATA19Q7Z5L4 167 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 FJX1Q86VR8 437 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 KIRREL3Q8IZU9 778 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 GHDCQ8N2G8 530 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 WDSUB1Q8N9V3 476 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 OR8J2Q8NGG1 315 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 ACTRT2Q8TDY3 377 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 TESCQ96BS2 214 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 SECISBP2Q96T21 854 aaKnown RBP12.71□□□□□ -0.37
TPM1-230ENST00000561266 ZNF703Q9H7S9 590 aaPredicted RBP12.71□□□□□ -0.37
TPM1-230ENST00000561266 CBLCQ9ULV8 474 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 SNX8Q9Y5X2 465 aa12.71□□□□□ -0.37
TPM1-230ENST00000561266 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
TPM1-230ENST00000561266 TRGV8A0A0C4DH27 118 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 SLCO1B7G3V0H7 640 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 FADS1O60427 444 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 DIAPH2O60879 1101 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 AGFG2O95081 481 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 IGHG3P01860 377 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 CA7P43166 264 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 CCT3P49368 545 aaKnown RBP12.7□□□□□ -0.38
TPM1-230ENST00000561266 MAN2A2P49641 1150 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 TMED10P49755 219 aaKnown RBP12.7□□□□□ -0.38
TPM1-230ENST00000561266 CASP9P55211 416 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 LASP1Q14847 261 aaKnown RBP12.7□□□□□ -0.38
TPM1-230ENST00000561266 FAM174BQ3ZCQ3 159 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 CYP27C1Q4G0S4 372 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 C4orf17Q53FE4 359 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 TMEM81Q6P7N7 255 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 C3P1Q6ZMU1 363 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 TRILQ7L0X0 811 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 SLC22A16Q86VW1 577 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 DOLPP1Q86YN1 238 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 FAM109AQ8N4B1 249 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 OR9I1Q8NGQ6 314 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 FAM110BQ8TC76 370 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 DYDC1Q8WWB3 177 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 SLC9A6Q92581 669 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 RELTQ969Z4 430 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 RMND5BQ96G75 393 aaPredicted RBP12.7□□□□□ -0.38
TPM1-230ENST00000561266 MAGEB18Q96M61 343 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 MS4A4EQ96PG1 132 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 PHF12Q96QT6 1004 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 INPP5KQ9BT40 448 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 SLC6A15Q9H2J7 730 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 UBQLN3Q9H347 655 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 METTL7AQ9H8H3 244 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 C3orf14Q9HBI5 128 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 ZCCHC3Q9NUD5 404 aaKnown RBP12.7□□□□□ -0.38
TPM1-230ENST00000561266 ATAD3AQ9NVI7 634 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 SPRR3Q9UBC9 169 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 SLC5A6Q9Y289 635 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 OR10H1Q9Y4A9 318 aa12.7□□□□□ -0.38
TPM1-230ENST00000561266 SPTBN1Q01082 2364 aaKnown RBP12.7□□□□□ -0.38
TPM1-230ENST00000561266 PHF3Q92576 2039 aaKnown RBP12.69□□□□□ -0.38
TPM1-230ENST00000561266 HECTD1Q9ULT8 2610 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 PRAMEF25A6NGN4 478 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 SNPHO15079 494 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 CFLARO15519 480 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 CPSF4O95639 269 aaKnown RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms