RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 DHX35Q9H5Z1 703 aaKnown RBP6.34□□□□□ -1.39
TSPAN3-209ENST00000560715 AKIRIN1Q9H9L7 192 aaPredicted RBP6.34□□□□□ -1.39
TSPAN3-209ENST00000560715 DYRK4Q9NR20 520 aa6.34□□□□□ -1.39
TSPAN3-209ENST00000560715 PRMT8Q9NR22 394 aaPredicted RBP6.34□□□□□ -1.39
TSPAN3-209ENST00000560715 KLHL9Q9P2J3 617 aa6.34□□□□□ -1.39
TSPAN3-209ENST00000560715 ALG5Q9Y673 324 aa6.34□□□□□ -1.39
TSPAN3-209ENST00000560715 V9GYH0 126 aa6.34□□□□□ -1.39
TSPAN3-209ENST00000560715 SSC5DA1L4H1 1573 aa6.34□□□□□ -1.4
TSPAN3-209ENST00000560715 DOCK5Q9H7D0 1870 aa6.34□□□□□ -1.4
TSPAN3-209ENST00000560715 A0A0G2JMZ2 1700 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 SLC22A23A1A5C7 686 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 HNRNPCL2B2RXH8 293 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 MYL12BO14950 172 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 SEC14L5O43304 696 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 TLX2O43763 284 aaPredicted RBP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 NOBOXO60393 691 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 MITFO75030 526 aaPredicted RBP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 FCER2P06734 321 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 ITGAMP11215 1152 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 MYL12AP19105 171 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 PSMA2P25787 234 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 SPRP35270 261 aaPredicted RBP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 CSKP41240 450 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 KIR2DL3P43628 341 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 MVDP53602 400 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 LIMK2P53671 638 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 HNRNPKP61978 463 aaKnown RBP eCLIP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 RRAS2P62070 204 aaPredicted RBP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 EXOSC2Q13868 293 aaKnown RBP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 CAPRIN1Q14444 709 aaKnown RBP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 ETFDHQ16134 617 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 FAM171A1Q5VUB5 890 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 ANKS6Q68DC2 871 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 BICRALQ6AI39 1079 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 ANKRD54Q6NXT1 300 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 TMEM88Q6PEY1 159 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 C5orf46Q6UWT4 87 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 SVOPLQ8N434 492 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 TMEM125Q96AQ2 219 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 LRRC58Q96CX6 371 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 Q96MT0 163 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 KRTAP3-3Q9BYR6 98 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 KRTAP3-2Q9BYR7 98 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 REG4Q9BYZ8 158 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 NMUR1Q9HB89 426 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 SLC30A4O14863 429 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 OGTO15294 1046 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 CYP7B1O75881 506 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 PGAM1P18669 254 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 GPX3P22352 226 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 CHRNA4P43681 627 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 GDI2P50395 445 aaKnown RBP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF79Q15937 498 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 CYP27C1Q4G0S4 372 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 IFNEQ86WN2 208 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 STX12Q86Y82 276 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 CFAP206Q8IYR0 622 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF431Q8TF32 576 aaPredicted RBP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 COQ8BQ96D53 544 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 NSMCE2Q96MF7 247 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 SPATA33Q96N06 139 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 QKIQ96PU8 341 aaKnown RBP eCLIP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 SIGLEC11Q96RL6 698 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 OSGEPL1Q9H4B0 414 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 MVB12BQ9H7P6 319 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 GPN1Q9HCN4 374 aaPredicted RBP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 GSN-AS1Q9NRJ2 163 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 MCUBQ9NWR8 336 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 LYARQ9NX58 379 aaKnown RBP6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 CTSFQ9UBX1 484 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 KIF25Q9UIL4 384 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 CD207Q9UJ71 328 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 V9GYQ6 96 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 OTOFQ9HC10 1997 aa6.33□□□□□ -1.4
TSPAN3-209ENST00000560715 A0A0J9YYE9 177 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 BCLAF3A2AJT9 711 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 EFCAB10A6NFE3 127 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 NR5A2O00482 541 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 EIF1BO60739 113 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 HUS1O60921 280 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CSF2P04141 144 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ITGB1P05556 798 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CHRM2P08172 466 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 MLNP12872 115 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 HRH2P25021 359 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CCND3P30281 292 aaPredicted RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 EIF1P41567 113 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 HOXC5Q00444 222 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 UGCGQ16739 394 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 RFX4Q33E94 735 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 UGT3A2Q3SY77 523 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 GPR33Q49SQ1 333 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 COQ5Q5HYK3 327 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 TCTE1Q5JU00 501 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 HLA-DQA1Q5Y7H0 255 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 LAIR1Q6GTX8 287 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 PLET1Q6UQ28 207 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 XYLT1Q86Y38 959 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 TMEM185AQ8NFB2 350 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 SUN3Q8TAQ9 357 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms