RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, human

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP8-209	ENST00000560297	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	TUBA3E	Q6PEY2	450 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	LYPD8	Q6UX82	237 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	IL20RB	Q6UXL0	311 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	HACD2	Q6Y1H2	254 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	ASB18	Q6ZVZ8	466 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	NUP54	Q7Z3B4	507 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	WDR53	Q7Z5U6	358 aa	Predicted RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	MSRB3	Q8IXL7	192 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	COX18	Q8N8Q8	333 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	GOLM1	Q8NBJ4	401 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	OR8J3	Q8NGG0	315 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	FAM110B	Q8TC76	370 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	DIO2	Q92813	273 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	TMBIM1	Q969X1	311 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	TMEM125	Q96AQ2	219 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	SPACA9	Q96E40	222 aa	Predicted RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	OMA1	Q96E52	524 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	AURKB	Q96GD4	344 aa	Predicted RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	SECISBP2	Q96T21	854 aa	Known RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	G6PC3	Q9BUM1	346 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	THUMPD3	Q9BV44	507 aa	Known RBP	11.31	□□□□□ -0.6
USP8-209	ENST00000560297	NANOG	Q9H9S0	305 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	ARL8B	Q9NVJ2	186 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	PLA2G3	Q9NZ20	509 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	LRFN1	Q9P244	771 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	LIPT1	Q9Y234	373 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	AP3M1	Q9Y2T2	418 aa		11.31	□□□□□ -0.6
USP8-209	ENST00000560297	C15orf38-AP3S2	A0A0A6YYH1	394 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	TMEM247	A6NEH6	219 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	OR6C70	A6NIJ9	312 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	CCT8L1P	A6NM43	557 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	HS6ST1	O60243	411 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	ZNF354A	O60765	605 aa	Predicted RBP	11.3	□□□□□ -0.6
USP8-209	ENST00000560297	KCNK2	O95069	426 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	IL33	O95760	270 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	GUSB	P08236	651 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	OR12D1	P0DN82	309 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	IL12B	P29460	328 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	MVD	P53602	400 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	RPS26	P62854	115 aa	Known RBP	11.3	□□□□□ -0.6
USP8-209	ENST00000560297	GNA13	Q14344	377 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	OR1C1	Q15619	314 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	NTRK2	Q16620	822 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	ARHGAP11B	Q3KRB8	267 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
USP8-209	ENST00000560297	SLC22A10	Q63ZE4	541 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	RTL4	Q6ZR62	310 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	ARPIN	Q7Z6K5	226 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	CYP4Z2P	Q8N1L4	340 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	BCORP1	Q8N888	145 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	EXD3	Q8N9H8	876 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	LSM14A	Q8ND56	463 aa	Known RBP	11.3	□□□□□ -0.6
USP8-209	ENST00000560297	CHDH	Q8NE62	594 aa	Predicted RBP	11.3	□□□□□ -0.6
USP8-209	ENST00000560297	OR4N2	Q8NGD1	307 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	PNPT1	Q8TCS8	783 aa	Known RBP	11.3	□□□□□ -0.6
USP8-209	ENST00000560297	PIK3R3	Q92569	461 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	CDS1	Q92903	461 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	TMCO6	Q96DC7	493 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	RMND5B	Q96G75	393 aa	Predicted RBP	11.3	□□□□□ -0.6
USP8-209	ENST00000560297	COL21A1	Q96P44	957 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
USP8-209	ENST00000560297	SLC25A18	Q9H1K4	315 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	SERHL2	Q9H4I8	314 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	ZBTB20	Q9HC78	741 aa	Predicted RBP	11.3	□□□□□ -0.6
USP8-209	ENST00000560297	TIMMDC1	Q9NPL8	285 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	POLE3	Q9NRF9	147 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	NDE1	Q9NXR1	346 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	CNIH4	Q9P003	139 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	TP53TG5	Q9Y2B4	290 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	PCDHGB6	Q9Y5F9	930 aa		11.3	□□□□□ -0.6
USP8-209	ENST00000560297	NUP214	P35658	2090 aa	Predicted RBP	11.3	□□□□□ -0.6
USP8-209	ENST00000560297	ZFHX4	Q86UP3	3567 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	TRAV17	A0A0B4J275	112 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	GXYLT2	A0PJZ3	443 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	HMGN4	O00479	90 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	TSPAN2	O60636	221 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	BMP2	P12643	396 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	CD46	P15529	392 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	ATP6V1C1	P21283	382 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	CALB2	P22676	271 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	NUDT2	P50583	147 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	TNFSF10	P50591	281 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	CASP9	P55211	416 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	DSTN	P60981	165 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	CAPRIN1	Q14444	709 aa	Known RBP	11.29	□□□□□ -0.6
USP8-209	ENST00000560297	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
USP8-209	ENST00000560297	COX20	Q5RI15	118 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	DCST2	Q5T1A1	773 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.29	□□□□□ -0.6
USP8-209	ENST00000560297	AP1AR	Q63HQ0	302 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	SPINK14	Q6IE38	97 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	HEPHL1	Q6MZM0	1159 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	C16orf62	Q7Z3J2	963 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	PRR22	Q8IZ63	422 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	METTL25	Q8N6Q8	603 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	OR5D16	Q8NGK9	328 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	FBXO30	Q8TB52	745 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	PMM1	Q92871	262 aa		11.29	□□□□□ -0.6
USP8-209	ENST00000560297	RAB8B	Q92930	207 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms