RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 CRYABP02511 175 aaKnown RBP18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 UQCRC2P22695 453 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 RFC3P40938 356 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 CASP3P42574 277 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 PRIM2P49643 509 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 PSPHP78330 225 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 IRX1P78414 480 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 SQLEQ14534 574 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 VPS26BQ4G0F5 336 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 METTL21CQ5VZV1 264 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 CDC73Q6P1J9 531 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 BLOC1S3Q6QNY0 202 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 ZFP62Q8NB50 900 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 DIO2Q92813 273 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 EFHD2Q96C19 240 aaPredicted RBP18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 CHMP6Q96FZ7 201 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 FAM173AQ9BQD7 235 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 ACTRT3Q9BYD9 372 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 SLC52A3Q9NQ40 469 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 CCDC167Q9P0B6 97 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 POLEQ07864 2286 aa18.62■□□□□ 0.57
TSPAN3-207ENST00000559494 RNF103-CHMP3A0A140T963 221 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 ANKRD33BA6NCL7 494 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 CCDC154A6NI56 674 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 IGKV1D-16P01601 117 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 C1QCP02747 245 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 ALOX5P09917 674 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 MAN2A2P49641 1150 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 SEC24CP53992 1094 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 PNLIPRP2P54317 469 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 FOXO1Q12778 655 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 DECR1Q16698 335 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 AGKQ53H12 422 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 POGLUT1Q8NBL1 392 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 FAM110BQ8TC76 370 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 NR4A3Q92570 626 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 PANX1Q96RD7 426 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 ANGPTL4Q9BY76 406 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 SERHL2Q9H4I8 314 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 OLAHQ9NV23 265 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 TUBA8Q9NY65 449 aaPredicted RBP18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 KLHL14Q9P2G3 628 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 TRIM33Q9UPN9 1127 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 KCNE3Q9Y6H6 103 aa18.61■□□□□ 0.57
TSPAN3-207ENST00000559494 ZNF407Q9C0G0 2248 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 IL33O95760 270 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 GSNP06396 782 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 CYP4B1P13584 511 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 IL12BP29460 328 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 KRT20P35900 424 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 PTGDSP41222 190 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 MRPS22P82650 360 aaKnown RBP18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 ALDH6A1Q02252 535 aaKnown RBP18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 LRRC74AQ0VAA2 488 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 TIGD2Q4W5G0 525 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 BHLHB9Q6PI77 547 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 ZNF621Q6ZSS3 439 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 MSANTD1Q6ZTZ1 278 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 SIAH3Q8IW03 269 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 JADE3Q92613 823 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 RMND5BQ96G75 393 aaPredicted RBP18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 STACQ99469 402 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 SLX1AQ9BQ83 275 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 PIGUQ9H490 435 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 DUSP22Q9NRW4 184 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 SLC6A13Q9NSD5 602 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 TMEM45AQ9NWC5 275 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 GIN1Q9NXP7 522 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 FAF1Q9UNN5 650 aaPredicted RBP18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 DNAJC13O75165 2243 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 FREM3P0C091 2139 aa18.6■□□□□ 0.57
TSPAN3-207ENST00000559494 HELZ2Q9BYK8 2649 aaKnown RBP18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 RFXANKO14593 260 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 ABCB7O75027 752 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 GLSO94925 669 aaPredicted RBP18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 MATN1P21941 496 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 LSP1P33241 339 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 TDGF1P3P51864 188 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 CASP9P55211 416 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 RPS26P62854 115 aaKnown RBP18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 RPP38P78345 283 aaKnown RBP18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 GTF3C1Q12789 2109 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 EFR3AQ14156 821 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 RCAN2Q14206 197 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 SAXO2Q658L1 398 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 TMEM81Q6P7N7 255 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 GK5Q6ZS86 529 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 ADAMTS15Q8TE58 950 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 RNF138Q8WVD3 245 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 C10orf82Q8WW14 230 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 GTF2H4Q92759 462 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 CDS1Q92903 461 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 TMCO6Q96DC7 493 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 SPDL1Q96EA4 605 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 ITCHQ96J02 903 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 OR7D2Q96RA2 312 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 SLC35A5Q9BS91 424 aa18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 TSPAN10Q9H1Z9 355 aaPredicted RBP18.59■□□□□ 0.57
TSPAN3-207ENST00000559494 RABEP2Q9H5N1 569 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms