RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 G6PC3Q9BUM1 346 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 A4GALTQ9NPC4 353 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 ABI3Q9P2A4 366 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 ABCD2Q9UBJ2 740 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF451Q9Y4E5 1061 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 NPFFR2Q9Y5X5 522 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 CELSR3Q9NYQ7 3312 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 FRYQ5TBA9 3013 aa11.52□□□□□ -0.57
SHMT2-221ENST00000555773 DMXL2Q8TDJ6 3036 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 A6NL46 340 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 ABCB7O75027 752 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 OR2J2O76002 312 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 KCNK2O95069 426 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 NADKO95544 446 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-221ENST00000555773 ALPPP05187 535 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 TFPTP0C1Z6 253 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 ABCD3P28288 659 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 SOX11P35716 441 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 KRT20P35900 424 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 TMED10P49755 219 aaKnown RBP11.51□□□□□ -0.57
SHMT2-221ENST00000555773 GZMMP51124 257 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 SSR4P51571 173 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 CXADRP78310 365 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 LIPEQ05469 1076 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 SELPLGQ14242 412 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 ADRM1Q16186 407 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 CYP51A1Q16850 503 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF630Q2M218 657 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-221ENST00000555773 SAMD4BQ5PRF9 694 aaKnown RBP11.51□□□□□ -0.57
SHMT2-221ENST00000555773 GCNT6Q5T4J0 391 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 PRAMEF8Q5VWM4 474 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 PRAMEF7Q5VXH5 474 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 ERICH5Q6P6B1 374 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 C16orf62Q7Z3J2 963 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 CALHM3Q86XJ0 350 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 SLC30A8Q8IWU4 369 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 GPALPP1Q8IXQ4 340 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 TMEM156Q8N614 296 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 BCORP1Q8N888 145 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 FBXO30Q8TB52 745 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 CDS1Q92903 461 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 RAB8BQ92930 207 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 REXO5Q96IC2 774 aaKnown RBP11.51□□□□□ -0.57
SHMT2-221ENST00000555773 RASL10BQ96S79 203 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 ZNF552Q9H707 407 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-221ENST00000555773 LIN28AQ9H9Z2 209 aaKnown RBP11.51□□□□□ -0.57
SHMT2-221ENST00000555773 POLE3Q9NRF9 147 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 GPR83Q9NYM4 423 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 ADA2Q9NZK5 511 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 CALML5Q9NZT1 146 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 P2RX2Q9UBL9 471 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 ZMIZ1Q9ULJ6 1067 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 PRPF19Q9UMS4 504 aaKnown RBP11.51□□□□□ -0.57
SHMT2-221ENST00000555773 PCDHGA9Q9Y5G4 932 aaKnown RBP11.51□□□□□ -0.57
SHMT2-221ENST00000555773 KCNE3Q9Y6H6 103 aa11.51□□□□□ -0.57
SHMT2-221ENST00000555773 GXYLT2A0PJZ3 443 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 OR6C70A6NIJ9 312 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 NME4O00746 187 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 STX11O75558 287 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 REM1O75628 298 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 PPM1BO75688 479 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 IL33O95760 270 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 FBXO45P0C2W1 286 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 NR2F1P10589 423 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 HLCSP50747 726 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 PNLIPRP2P54317 469 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 CDK6Q00534 326 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 PLCXD2Q0VAA5 305 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 MFAP5Q13361 173 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 EFR3AQ14156 821 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 TBR1Q16650 682 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.5□□□□□ -0.57
SHMT2-221ENST00000555773 DCST2Q5T1A1 773 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 B3GNTL1Q67FW5 361 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-221ENST00000555773 FCRLBQ6BAA4 426 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 BNC2Q6ZN30 1099 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-221ENST00000555773 C16orf47Q6ZP98 133 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-221ENST00000555773 LRRC74BQ6ZQY2 392 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 NUP54Q7Z3B4 507 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 C11orf65Q8NCR3 313 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 FDCSPQ8NFU4 85 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 TNIP2Q8NFZ5 429 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 OR2T12Q8NG77 320 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 OR4N2Q8NGD1 307 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 SLC38A5Q8WUX1 472 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 PIK3R3Q92569 461 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 TTC9Q92623 222 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 DIO2Q92813 273 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 TMBIM1Q969X1 311 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 OMA1Q96E52 524 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 RMND5BQ96G75 393 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-221ENST00000555773 SGCZQ96LD1 299 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 SDF2Q99470 211 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 TRIM8Q9BZR9 551 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 HOXD1Q9GZZ0 328 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 RNF32Q9H0A6 362 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 SAP130Q9H0E3 1048 aa11.5□□□□□ -0.57
SHMT2-221ENST00000555773 MMADHCQ9H3L0 296 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-221ENST00000555773 TRIM45Q9H8W5 580 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-221ENST00000555773 MTHFD2LQ9H903 347 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms