RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 DCST2Q5T1A1 773 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 MEDAGQ5VYS4 303 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 GLRX5Q86SX6 157 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 TMEM126BQ8IUX1 230 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 ZNF100Q8IYN0 542 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 RNF182Q8N6D2 247 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 Q8N9W7 124 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 FAM162AQ96A26 154 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 ACCSQ96QU6 501 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 PLA2G2FQ9BZM2 168 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 GANQ9H2C0 597 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 TMEM161AQ9NX61 479 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 VPS18Q9P253 973 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 SCML2Q9UQR0 700 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 POMT1Q9Y6A1 747 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 USP6P35125 1406 aa1.38□□□□□ -2.19
SRP54-207ENST00000555535 A0A0J9YVX5 310 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 TMEM150BA6NC51 233 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 TBL1XO60907 577 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 IGLV3-19P01714 112 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 MMP1P03956 469 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 CASTP20810 708 aaKnown RBP1.37□□□□□ -2.19
SRP54-207ENST00000555535 GEMP55040 296 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 HERV-K104P63124 156 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 OC90Q02509 493 aaPredicted RBP1.37□□□□□ -2.19
SRP54-207ENST00000555535 MADCAM1Q13477 382 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 SF3A2Q15428 464 aaKnown RBP1.37□□□□□ -2.19
SRP54-207ENST00000555535 TSPO2Q5TGU0 170 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 CD164L2Q6UWJ8 174 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 ABHD12BQ7Z5M8 362 aaPredicted RBP1.37□□□□□ -2.19
SRP54-207ENST00000555535 TSEN54Q7Z6J9 526 aaKnown RBP1.37□□□□□ -2.19
SRP54-207ENST00000555535 LINC01551Q86U37 167 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 SIAH3Q8IW03 269 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 TAF4BQ92750 862 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 MR1Q95460 341 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 AP2M1Q96CW1 435 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 ZNF670Q9BS34 389 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 APOOQ9BUR5 198 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 ABCG8Q9H221 673 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 APMAPQ9HDC9 416 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 ELOVL2Q9NXB9 296 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 SEPT10Q9P0V9 454 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 L3MBTL1Q9Y468 752 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 TTLL3Q9Y4R7 772 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 WIF1Q9Y5W5 379 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 PTPRUQ92729 1446 aa1.37□□□□□ -2.19
SRP54-207ENST00000555535 TRBV7-9A0A0J9YWB2 115 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 PSMB11A5LHX3 300 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 OOEPA6NGQ2 149 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 TUBAL3A6NHL2 446 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 SDC3O75056 442 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 UFL1O94874 794 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 GAS8O95995 478 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 INSP01308 110 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 PCCAP05165 728 aaPredicted RBP1.36□□□□□ -2.19
SRP54-207ENST00000555535 STSP08842 583 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 HOXD10P28358 340 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 STIP1P31948 543 aaKnown RBP1.36□□□□□ -2.19
SRP54-207ENST00000555535 ACADSBP45954 432 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 UBXN1Q04323 297 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 TFCP2Q12800 502 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 UNC119Q13432 240 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 DPYSQ14117 519 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 DPYSL3Q14195 570 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 GK2Q14410 553 aaPredicted RBP1.36□□□□□ -2.19
SRP54-207ENST00000555535 ZKSCAN8Q15776 578 aaPredicted RBP1.36□□□□□ -2.19
SRP54-207ENST00000555535 OR5M10Q6IEU7 315 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 KRT77Q7Z794 578 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 METTL23Q86XA0 190 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 PYROXD2Q8N2H3 581 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 ANKRD49Q8WVL7 239 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 P3H4Q92791 437 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 DLX4Q92988 240 aaPredicted RBP1.36□□□□□ -2.19
SRP54-207ENST00000555535 RPGRIP1Q96KN7 1286 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 GBP5Q96PP8 586 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 ING2Q9H160 280 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 CD274Q9NZQ7 290 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 NFKBIL1Q9UBC1 381 aaPredicted RBP1.36□□□□□ -2.19
SRP54-207ENST00000555535 TRPC4Q9UBN4 977 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 CDH7Q9ULB5 785 aa1.36□□□□□ -2.19
SRP54-207ENST00000555535 DHRS7CA6NNS2 312 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 K7ENP7 123 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 IMPA2O14732 288 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 TTI1O43156 1089 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 IGSF6O95976 241 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 IGHV3-48P01763 117 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 PGK2P07205 417 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 IFNAR1P17181 557 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 UGT1A5P35504 534 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 NPRL3Q12980 569 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 KCNJ11Q14654 390 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 RALBP1Q15311 655 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 LRRC36Q1X8D7 754 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 CMPK2Q5EBM0 449 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 TOR1AIP1Q5JTV8 583 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 Q5W150 140 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 ZNF429Q86V71 674 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 CCDC83Q8IWF9 413 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 STHQ8IWL8 128 aa1.35□□□□□ -2.19
SRP54-207ENST00000555535 SIDT2Q8NBJ9 832 aaKnown RBP1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms