RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 LRGUKQ96M69 825 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 ZNF607Q96SK3 696 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 YIPF4Q9BSR8 244 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 ATP13A2Q9NQ11 1180 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 ACTR3BQ9P1U1 418 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 ABI3Q9P2A4 366 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 SLC7A8Q9UHI5 535 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 CBLCQ9ULV8 474 aa13.44□□□□□ -0.26
SHMT2-210ENST00000553950 GPR55Q9Y2T6 319 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-210ENST00000553950 A0A0G2JPF8 293 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 HNRNPCL2B2RXH8 293 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 HNRNPCL3B7ZW38 293 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 CXCR6O00574 342 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 HS6ST1O60243 411 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 STX11O75558 287 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 HNRNPCL4P0DMR1 293 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 CT45A8P0DMV1 189 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 CT45A9P0DMV2 189 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 GGT1P19440 569 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 IL12BP29460 328 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 PIGAP37287 484 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 POLE2P56282 527 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 KCNJ2P63252 427 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 PLCXD2Q0VAA5 305 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 FLOT2Q14254 428 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.43□□□□□ -0.26
SHMT2-210ENST00000553950 CT45A2Q5DJT8 189 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 DCAF10Q5QP82 559 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 C1orf146Q5VVC0 180 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 LCN8Q6JVE9 175 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 SLC34A3Q8N130 599 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 EID3Q8N140 333 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 RNF148Q8N7C7 305 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 ZNF321PQ8N8H1 164 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 BHLHE22Q8NFJ8 381 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-210ENST00000553950 NFKBIDQ8NI38 313 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 DOK4Q8TEW6 326 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 SLC38A5Q8WUX1 472 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 GATA6Q92908 595 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 RAB8BQ92930 207 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 ADIPOR1Q96A54 375 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 RMND5BQ96G75 393 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-210ENST00000553950 TMEM19Q96HH6 336 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 NSMCE2Q96MF7 247 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 ZNF350Q9GZX5 532 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 HHATLQ9HCP6 504 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 BCL2L10Q9HD36 194 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 ZNF223Q9UK11 482 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-210ENST00000553950 WDR45Q9Y484 360 aa13.43□□□□□ -0.26
SHMT2-210ENST00000553950 WDFY3Q8IZQ1 3526 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 TMEM8BA6NDV4 472 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 ARPC2O15144 300 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 TLX3O43711 291 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-210ENST00000553950 SERPINB7O75635 380 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 TFPTP0C1Z6 253 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 ETS2P15036 469 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 NAGAP17050 411 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 CASP9P55211 416 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 CORO7P57737 925 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 RPP38P78345 283 aaKnown RBP13.42□□□□□ -0.26
SHMT2-210ENST00000553950 EFR3AQ14156 821 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 ADRM1Q16186 407 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 NPSR1Q6W5P4 371 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 LRRC69Q6ZNQ3 347 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 CCDC80Q76M96 950 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 DHFR2Q86XF0 187 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 ARMC10Q8N2F6 343 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 ZNF527Q8NB42 609 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 GOLM1Q8NBJ4 401 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 SIMC1Q8NDZ2 872 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 FIG4Q92562 907 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 FAM162AQ96A26 154 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 SLC35A4Q96G79 324 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 CLPTM1LQ96KA5 538 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 HOXD1Q9GZZ0 328 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 NXF5Q9H1B4 397 aaKnown RBP13.42□□□□□ -0.26
SHMT2-210ENST00000553950 PIF1Q9H611 641 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 GORASP2Q9H8Y8 452 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 MYOTQ9UBF9 498 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 RPS6KA6Q9UK32 745 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 SAMD4AQ9UPU9 718 aaKnown RBP13.42□□□□□ -0.26
SHMT2-210ENST00000553950 POMPQ9Y244 141 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 DTX4Q9Y2E6 619 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 PCDHGA10Q9Y5H3 936 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 DOCK10Q96BY6 2186 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 DCHS1Q96JQ0 3298 aa13.42□□□□□ -0.26
SHMT2-210ENST00000553950 DSPPQ9NZW4 1301 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 ACACAQ13085 2346 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 AQP12BA6NM10 295 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 KIAA0513O60268 411 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 KCNK2O95069 426 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 H6PDO95479 791 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 NUDT7P0C024 238 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 NR0B1P51843 470 aaKnown RBP13.41□□□□□ -0.26
SHMT2-210ENST00000553950 PCBP3P57721 371 aaKnown RBP13.41□□□□□ -0.26
SHMT2-210ENST00000553950 ZSWIM7Q19AV6 140 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 OPN5Q6U736 354 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 AQP12AQ8IXF9 295 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 GPALPP1Q8IXQ4 340 aa13.41□□□□□ -0.26
SHMT2-210ENST00000553950 PEX5LQ8IYB4 626 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms