RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 MATN1P21941 496 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 AP2B1P63010 937 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 BTG2P78543 158 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 PRICKLE4Q2TBC4 344 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 COX20Q5RI15 118 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 ATAD3BQ5T9A4 648 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 ZNF385CQ66K41 422 aaPredicted RBP13.44□□□□□ -0.26
SHMT2-208ENST00000553868 ZCCHC12Q6PEW1 402 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 COX15Q7KZN9 410 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 EID3Q8N140 333 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 CISD2Q8N5K1 135 aaKnown RBP13.44□□□□□ -0.26
SHMT2-208ENST00000553868 RBMXL3Q8N7X1 1067 aaKnown RBP13.44□□□□□ -0.26
SHMT2-208ENST00000553868 GALNT6Q8NCL4 622 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 ADCY4Q8NFM4 1077 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 OR7G2Q8NG99 324 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 STT3BQ8TCJ2 826 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 FIG4Q92562 907 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 FAM162AQ96A26 154 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 ART5Q96L15 291 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 ACTRT3Q9BYD9 372 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 CHST8Q9H2A9 424 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 SLC26A1Q9H2B4 701 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 DCLRE1BQ9H816 532 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 A4GALTQ9NPC4 353 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 MAT2BQ9NZL9 334 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 GMPR2Q9P2T1 348 aaKnown RBP13.44□□□□□ -0.26
SHMT2-208ENST00000553868 P2RX2Q9UBL9 471 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 IGKV3D-11A0A0A0MRZ8 115 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 C5orf58C9J3I9 102 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 UPK1AO00322 258 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 LRRTM2O43300 516 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 JRKO75564 520 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 PSMG1O95456 288 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 ATP6V1G2O95670 118 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 IFNA14P01570 189 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 HMGN2P05204 90 aaKnown RBP13.43□□□□□ -0.26
SHMT2-208ENST00000553868 GPIP06744 558 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 C8BP07358 591 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 ZGLP1P0C6A0 271 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 ATXN8OSP0DMR3 200 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 ARAFP10398 606 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 UMPSP11172 480 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 ATP6V1B2P21281 511 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 PSMA4P25789 261 aaKnown RBP13.43□□□□□ -0.26
SHMT2-208ENST00000553868 CDK6Q00534 326 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 RHAGQ02094 409 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 LASP1Q14847 261 aaKnown RBP13.43□□□□□ -0.26
SHMT2-208ENST00000553868 TNFAIP8L2Q6P589 184 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-208ENST00000553868 CYP2R1Q6VVX0 501 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 SPNS3Q6ZMD2 512 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 PTOV1Q86YD1 416 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 SPPL2CQ8IUH8 684 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 LGI4Q8N135 537 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 SLC38A9Q8NBW4 561 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 PLPP5Q8NEB5 264 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 NANOS1Q8WY41 292 aaKnown RBP13.43□□□□□ -0.26
SHMT2-208ENST00000553868 RNF145Q96MT1 663 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 OR51I1Q9H343 314 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 WDR54Q9H977 334 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 CXorf21Q9HAI6 301 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 ADAP2Q9NPF8 381 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 NECTIN3Q9NQS3 549 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 SLC22A11Q9NSA0 550 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 EXD2Q9NVH0 621 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 GPATCH2Q9NW75 528 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 CTSFQ9UBX1 484 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 RPS6KA6Q9UK32 745 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 MKL2Q9ULH7 1088 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 USP22Q9UPT9 525 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 PCDHGB3Q9Y5G1 929 aa13.43□□□□□ -0.26
SHMT2-208ENST00000553868 TCRBV16S1A1N1A0A5B0 115 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 TCRBV3S1A0A5B6 114 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 ARGFXA6NJG6 315 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 TTC36A6NLP5 189 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 PDE9AO76083 593 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 HEXBP07686 556 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 NCK1P16333 377 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 PTGER1P34995 402 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 SOX11P35716 441 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 MRPS35P82673 323 aaKnown RBP13.42□□□□□ -0.26
SHMT2-208ENST00000553868 SCARB2Q14108 478 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 ELOAQ14241 798 aaKnown RBP13.42□□□□□ -0.26
SHMT2-208ENST00000553868 ELAVL1Q15717 326 aaKnown RBP13.42□□□□□ -0.26
SHMT2-208ENST00000553868 NSDHLQ15738 373 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 ADRM1Q16186 407 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 VWA2Q5GFL6 755 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 MFSD12Q6NUT3 480 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 CDC73Q6P1J9 531 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 FAM111BQ6SJ93 734 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 C6orf15Q6UXA7 325 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-208ENST00000553868 GDF7Q7Z4P5 450 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 C10orf111Q8N326 155 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 HORMAD2Q8N7B1 307 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 CDRT4Q8N9R6 151 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 OR7G1Q8NGA0 311 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 ADAMTS15Q8TE58 950 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 METTL21AQ8WXB1 218 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 DAZLQ92904 295 aaKnown RBP13.42□□□□□ -0.26
SHMT2-208ENST00000553868 MR1Q95460 341 aa13.42□□□□□ -0.26
SHMT2-208ENST00000553868 PPWD1Q96BP3 646 aaKnown RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms